Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.13■■□□□ 1.29
TMEM88BA6NKF7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TMEM88BA6NKF7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
TMEM88BA6NKF7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TMEM88BA6NKF7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TMEM88BA6NKF7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TMEM88BA6NKF7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC23.13■■□□□ 1.29
TMEM88BA6NKF7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC23.13■■□□□ 1.29
TMEM88BA6NKF7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TMEM88BA6NKF7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC23.13■■□□□ 1.29
TMEM88BA6NKF7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC23.13■■□□□ 1.29
TMEM88BA6NKF7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
TMEM88BA6NKF7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
TMEM88BA6NKF7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TMEM88BA6NKF7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TMEM88BA6NKF7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.13■■□□□ 1.29
TMEM88BA6NKF7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC23.13■■□□□ 1.29
TMEM88BA6NKF7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TMEM88BA6NKF7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TMEM88BA6NKF7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
TMEM88BA6NKF7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TMEM88BA6NKF7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
TMEM88BA6NKF7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TMEM88BA6NKF7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TMEM88BA6NKF7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TMEM88BA6NKF7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TMEM88BA6NKF7 CA15P1-201ENST00000481698 905 ntBASIC23.12■■□□□ 1.29
TMEM88BA6NKF7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC23.12■■□□□ 1.29
TMEM88BA6NKF7 HLA-A-209ENST00000638375 975 ntBASIC23.12■■□□□ 1.29
TMEM88BA6NKF7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TMEM88BA6NKF7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC23.12■■□□□ 1.29
TMEM88BA6NKF7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.12■■□□□ 1.29
TMEM88BA6NKF7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TMEM88BA6NKF7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.11■■□□□ 1.29
TMEM88BA6NKF7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC23.11■■□□□ 1.29
TMEM88BA6NKF7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC23.11■■□□□ 1.29
TMEM88BA6NKF7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
TMEM88BA6NKF7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TMEM88BA6NKF7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC23.11■■□□□ 1.29
TMEM88BA6NKF7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC23.11■■□□□ 1.29
TMEM88BA6NKF7 IFNL4P1-201ENST00000607083 540 ntBASIC23.11■■□□□ 1.29
TMEM88BA6NKF7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
TMEM88BA6NKF7 AL031008.1-201ENST00000619963 541 ntBASIC23.11■■□□□ 1.29
TMEM88BA6NKF7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC23.11■■□□□ 1.29
TMEM88BA6NKF7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TMEM88BA6NKF7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TMEM88BA6NKF7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC23.11■■□□□ 1.29
TMEM88BA6NKF7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TMEM88BA6NKF7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC23.1■■□□□ 1.29
TMEM88BA6NKF7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
TMEM88BA6NKF7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC23.1■■□□□ 1.29
TMEM88BA6NKF7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
TMEM88BA6NKF7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.1■■□□□ 1.29
TMEM88BA6NKF7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TMEM88BA6NKF7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC23.1■■□□□ 1.29
TMEM88BA6NKF7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC23.1■■□□□ 1.29
TMEM88BA6NKF7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC23.1■■□□□ 1.29
TMEM88BA6NKF7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC23.1■■□□□ 1.29
TMEM88BA6NKF7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC23.1■■□□□ 1.29
TMEM88BA6NKF7 AC104692.2-201ENST00000603054 253 ntBASIC23.1■■□□□ 1.29
TMEM88BA6NKF7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC23.1■■□□□ 1.29
TMEM88BA6NKF7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TMEM88BA6NKF7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TMEM88BA6NKF7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.1■■□□□ 1.29
TMEM88BA6NKF7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC23.1■■□□□ 1.29
TMEM88BA6NKF7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TMEM88BA6NKF7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC23.09■■□□□ 1.29
TMEM88BA6NKF7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TMEM88BA6NKF7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TMEM88BA6NKF7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TMEM88BA6NKF7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TMEM88BA6NKF7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC23.09■■□□□ 1.29
TMEM88BA6NKF7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC23.09■■□□□ 1.29
TMEM88BA6NKF7 EMBP1-201ENST00000458200 901 ntBASIC23.09■■□□□ 1.29
TMEM88BA6NKF7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC23.09■■□□□ 1.29
TMEM88BA6NKF7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC23.09■■□□□ 1.29
TMEM88BA6NKF7 AP003041.3-201ENST00000527151 707 ntBASIC23.09■■□□□ 1.29
TMEM88BA6NKF7 AL160237.2-201ENST00000556165 472 ntBASIC23.09■■□□□ 1.29
TMEM88BA6NKF7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC23.09■■□□□ 1.29
TMEM88BA6NKF7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
TMEM88BA6NKF7 FGF14-AS2-201ENST00000606448 1074 ntBASIC23.09■■□□□ 1.29
TMEM88BA6NKF7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.09■■□□□ 1.29
TMEM88BA6NKF7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC23.09■■□□□ 1.29
TMEM88BA6NKF7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TMEM88BA6NKF7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TMEM88BA6NKF7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
TMEM88BA6NKF7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TMEM88BA6NKF7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TMEM88BA6NKF7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC23.08■■□□□ 1.29
TMEM88BA6NKF7 SPDYE13P-201ENST00000445314 798 ntBASIC23.08■■□□□ 1.29
TMEM88BA6NKF7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TMEM88BA6NKF7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
TMEM88BA6NKF7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TMEM88BA6NKF7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TMEM88BA6NKF7 TFP1-202ENST00000475455 1573 ntBASIC23.08■■□□□ 1.29
TMEM88BA6NKF7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.08■■□□□ 1.29
TMEM88BA6NKF7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TMEM88BA6NKF7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
TMEM88BA6NKF7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
TMEM88BA6NKF7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms