Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 MIR3621-201ENST00000580529 85 ntBASIC14.04□□□□□ -0.16
LINC01549A6NIU2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC01549A6NIU2 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC01549A6NIU2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
LINC01549A6NIU2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC01549A6NIU2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC01549A6NIU2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01549A6NIU2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01549A6NIU2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01549A6NIU2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01549A6NIU2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01549A6NIU2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01549A6NIU2 PGM5P4-201ENST00000421970 445 ntBASIC14.03□□□□□ -0.16
LINC01549A6NIU2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC01549A6NIU2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
LINC01549A6NIU2 KRT16P3-201ENST00000439127 1283 ntBASIC14.03□□□□□ -0.16
LINC01549A6NIU2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC01549A6NIU2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01549A6NIU2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01549A6NIU2 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01549A6NIU2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01549A6NIU2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01549A6NIU2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC01549A6NIU2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01549A6NIU2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01549A6NIU2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01549A6NIU2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01549A6NIU2 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01549A6NIU2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01549A6NIU2 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01549A6NIU2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01549A6NIU2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC14.02□□□□□ -0.16
LINC01549A6NIU2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01549A6NIU2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14.02□□□□□ -0.16
LINC01549A6NIU2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01549A6NIU2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01549A6NIU2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01549A6NIU2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
LINC01549A6NIU2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
LINC01549A6NIU2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01549A6NIU2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01549A6NIU2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01549A6NIU2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01549A6NIU2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01549A6NIU2 BX842568.3-201ENST00000418104 571 ntBASIC14.02□□□□□ -0.17
LINC01549A6NIU2 UNC93B8-201ENST00000511903 705 ntBASIC14.02□□□□□ -0.17
LINC01549A6NIU2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01549A6NIU2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01549A6NIU2 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC01549A6NIU2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
LINC01549A6NIU2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC01549A6NIU2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01549A6NIU2 PKD1P1-201ENST00000458669 6805 ntBASIC14.02□□□□□ -0.17
LINC01549A6NIU2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01549A6NIU2 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01549A6NIU2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LINC01549A6NIU2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01549A6NIU2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
LINC01549A6NIU2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01549A6NIU2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC01549A6NIU2 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01549A6NIU2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01549A6NIU2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LINC01549A6NIU2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC01549A6NIU2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01549A6NIU2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01549A6NIU2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
LINC01549A6NIU2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC01549A6NIU2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LINC01549A6NIU2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01549A6NIU2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01549A6NIU2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC01549A6NIU2 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms