Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 AC008406.3-201ENST00000620001 1374 ntBASIC17.11■□□□□ 0.33
HMX3A6NHT5 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMX3A6NHT5 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMX3A6NHT5 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.11■□□□□ 0.33
HMX3A6NHT5 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMX3A6NHT5 AC090164.3-201ENST00000610780 2143 ntBASIC17.11■□□□□ 0.33
HMX3A6NHT5 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMX3A6NHT5 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMX3A6NHT5 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMX3A6NHT5 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.1■□□□□ 0.33
HMX3A6NHT5 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
HMX3A6NHT5 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
HMX3A6NHT5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMX3A6NHT5 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
HMX3A6NHT5 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMX3A6NHT5 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMX3A6NHT5 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.1■□□□□ 0.33
HMX3A6NHT5 AL691432.2-201ENST00000607222 2038 ntBASIC17.1■□□□□ 0.33
HMX3A6NHT5 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HMX3A6NHT5 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.1■□□□□ 0.33
HMX3A6NHT5 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.1■□□□□ 0.33
HMX3A6NHT5 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMX3A6NHT5 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
HMX3A6NHT5 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMX3A6NHT5 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMX3A6NHT5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.1■□□□□ 0.33
HMX3A6NHT5 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMX3A6NHT5 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMX3A6NHT5 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMX3A6NHT5 AL354751.1-201ENST00000412768 1863 ntBASIC17.1■□□□□ 0.33
HMX3A6NHT5 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMX3A6NHT5 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.09■□□□□ 0.33
HMX3A6NHT5 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMX3A6NHT5 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMX3A6NHT5 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMX3A6NHT5 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMX3A6NHT5 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMX3A6NHT5 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HMX3A6NHT5 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMX3A6NHT5 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMX3A6NHT5 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
HMX3A6NHT5 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
HMX3A6NHT5 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.09■□□□□ 0.33
HMX3A6NHT5 MIR4767-201ENST00000582827 78 ntBASIC17.09■□□□□ 0.33
HMX3A6NHT5 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMX3A6NHT5 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HMX3A6NHT5 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.09■□□□□ 0.33
HMX3A6NHT5 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.09■□□□□ 0.33
HMX3A6NHT5 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.09■□□□□ 0.33
HMX3A6NHT5 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMX3A6NHT5 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMX3A6NHT5 AC012313.1-201ENST00000593393 3059 ntBASIC17.09■□□□□ 0.33
HMX3A6NHT5 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.08■□□□□ 0.33
HMX3A6NHT5 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
HMX3A6NHT5 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HMX3A6NHT5 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
HMX3A6NHT5 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
HMX3A6NHT5 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HMX3A6NHT5 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HMX3A6NHT5 BICD1-207ENST00000551848 1962 ntBASIC17.08■□□□□ 0.33
HMX3A6NHT5 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HMX3A6NHT5 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
HMX3A6NHT5 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
HMX3A6NHT5 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMX3A6NHT5 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.08■□□□□ 0.32
HMX3A6NHT5 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.08■□□□□ 0.32
HMX3A6NHT5 AC024257.2-201ENST00000549699 147 ntBASIC17.08■□□□□ 0.32
HMX3A6NHT5 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.08■□□□□ 0.32
HMX3A6NHT5 AL136162.1-201ENST00000607711 1078 ntBASIC17.08■□□□□ 0.32
HMX3A6NHT5 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.08■□□□□ 0.32
HMX3A6NHT5 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HMX3A6NHT5 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
HMX3A6NHT5 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.08■□□□□ 0.32
HMX3A6NHT5 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
HMX3A6NHT5 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HMX3A6NHT5 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
HMX3A6NHT5 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.08■□□□□ 0.32
HMX3A6NHT5 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
HMX3A6NHT5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMX3A6NHT5 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
HMX3A6NHT5 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.08■□□□□ 0.32
HMX3A6NHT5 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
HMX3A6NHT5 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMX3A6NHT5 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMX3A6NHT5 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
HMX3A6NHT5 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMX3A6NHT5 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMX3A6NHT5 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HMX3A6NHT5 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMX3A6NHT5 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMX3A6NHT5 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HMX3A6NHT5 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMX3A6NHT5 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMX3A6NHT5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMX3A6NHT5 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.07■□□□□ 0.32
HMX3A6NHT5 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HMX3A6NHT5 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMX3A6NHT5 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HMX3A6NHT5 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HMX3A6NHT5 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms