Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC135050.7-201ENST00000624508 2218 ntBASIC17.24■□□□□ 0.35
SHISA3A0PJX4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHISA3A0PJX4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
SHISA3A0PJX4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SHISA3A0PJX4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHISA3A0PJX4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.23■□□□□ 0.35
SHISA3A0PJX4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SHISA3A0PJX4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHISA3A0PJX4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
SHISA3A0PJX4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHISA3A0PJX4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
SHISA3A0PJX4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
SHISA3A0PJX4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHISA3A0PJX4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.23■□□□□ 0.35
SHISA3A0PJX4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SHISA3A0PJX4 PBX2P1-201ENST00000493219 1291 ntBASIC17.23■□□□□ 0.35
SHISA3A0PJX4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.23■□□□□ 0.35
SHISA3A0PJX4 CCDC92B-201ENST00000575506 885 ntBASIC17.23■□□□□ 0.35
SHISA3A0PJX4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SHISA3A0PJX4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHISA3A0PJX4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.23■□□□□ 0.35
SHISA3A0PJX4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHISA3A0PJX4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHISA3A0PJX4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.22■□□□□ 0.35
SHISA3A0PJX4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.22■□□□□ 0.35
SHISA3A0PJX4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.22■□□□□ 0.35
SHISA3A0PJX4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHISA3A0PJX4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHISA3A0PJX4 AC087633.2-202ENST00000565166 1439 ntBASIC17.22■□□□□ 0.35
SHISA3A0PJX4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SHISA3A0PJX4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SHISA3A0PJX4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHISA3A0PJX4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.22■□□□□ 0.35
SHISA3A0PJX4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.22■□□□□ 0.35
SHISA3A0PJX4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.22■□□□□ 0.35
SHISA3A0PJX4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SHISA3A0PJX4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.22■□□□□ 0.35
SHISA3A0PJX4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.22■□□□□ 0.35
SHISA3A0PJX4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.22■□□□□ 0.35
SHISA3A0PJX4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.22■□□□□ 0.35
SHISA3A0PJX4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SHISA3A0PJX4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SHISA3A0PJX4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHISA3A0PJX4 AP001271.2-201ENST00000624018 1556 ntBASIC17.22■□□□□ 0.35
SHISA3A0PJX4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHISA3A0PJX4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHISA3A0PJX4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHISA3A0PJX4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHISA3A0PJX4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SHISA3A0PJX4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHISA3A0PJX4 KRT8P17-201ENST00000453110 1448 ntBASIC17.21■□□□□ 0.35
SHISA3A0PJX4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHISA3A0PJX4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHISA3A0PJX4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHISA3A0PJX4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHISA3A0PJX4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHISA3A0PJX4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHISA3A0PJX4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHISA3A0PJX4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.21■□□□□ 0.35
SHISA3A0PJX4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHISA3A0PJX4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHISA3A0PJX4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHISA3A0PJX4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHISA3A0PJX4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHISA3A0PJX4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHISA3A0PJX4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.21■□□□□ 0.35
SHISA3A0PJX4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SHISA3A0PJX4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.21■□□□□ 0.35
SHISA3A0PJX4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHISA3A0PJX4 EDA-201ENST00000338901 1233 ntBASIC17.21■□□□□ 0.35
SHISA3A0PJX4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.21■□□□□ 0.35
SHISA3A0PJX4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.21■□□□□ 0.35
SHISA3A0PJX4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.21■□□□□ 0.35
SHISA3A0PJX4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.21■□□□□ 0.35
SHISA3A0PJX4 AC106739.1-201ENST00000617035 715 ntBASIC17.21■□□□□ 0.35
SHISA3A0PJX4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.21■□□□□ 0.35
SHISA3A0PJX4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHISA3A0PJX4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHISA3A0PJX4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHISA3A0PJX4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHISA3A0PJX4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHISA3A0PJX4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.34
SHISA3A0PJX4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
SHISA3A0PJX4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
SHISA3A0PJX4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SHISA3A0PJX4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SHISA3A0PJX4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms