Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00959A0A1B0GUT2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00959A0A1B0GUT2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
LINC00959A0A1B0GUT2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
LINC00959A0A1B0GUT2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC00959A0A1B0GUT2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.25
LINC00959A0A1B0GUT2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
LINC00959A0A1B0GUT2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00959A0A1B0GUT2 CNN2P6-201ENST00000439038 900 ntBASIC13.46□□□□□ -0.25
LINC00959A0A1B0GUT2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC13.46□□□□□ -0.25
LINC00959A0A1B0GUT2 DUX4L16-201ENST00000555130 1264 ntBASIC13.46□□□□□ -0.25
LINC00959A0A1B0GUT2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00959A0A1B0GUT2 AC087623.3-201ENST00000607047 1098 ntBASIC13.46□□□□□ -0.25
LINC00959A0A1B0GUT2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC00959A0A1B0GUT2 AC008694.1-202ENST00000636953 945 ntBASIC13.46□□□□□ -0.25
LINC00959A0A1B0GUT2 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00959A0A1B0GUT2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00959A0A1B0GUT2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
LINC00959A0A1B0GUT2 AP000974.1-201ENST00000623909 2387 ntBASIC13.46□□□□□ -0.25
LINC00959A0A1B0GUT2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00959A0A1B0GUT2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
LINC00959A0A1B0GUT2 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00959A0A1B0GUT2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC13.46□□□□□ -0.26
LINC00959A0A1B0GUT2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00959A0A1B0GUT2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00959A0A1B0GUT2 RNF165-205ENST00000588679 2904 ntBASIC13.46□□□□□ -0.26
LINC00959A0A1B0GUT2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC13.46□□□□□ -0.26
LINC00959A0A1B0GUT2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 Z82202.1-201ENST00000623446 1880 ntBASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 KRT18P5-201ENST00000436075 1291 ntBASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 CYP2T3P-201ENST00000601990 817 ntBASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00959A0A1B0GUT2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
LINC00959A0A1B0GUT2 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00959A0A1B0GUT2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
LINC00959A0A1B0GUT2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC13.44□□□□□ -0.26
LINC00959A0A1B0GUT2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00959A0A1B0GUT2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00959A0A1B0GUT2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC13.44□□□□□ -0.26
LINC00959A0A1B0GUT2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00959A0A1B0GUT2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC13.44□□□□□ -0.26
LINC00959A0A1B0GUT2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00959A0A1B0GUT2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
LINC00959A0A1B0GUT2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00959A0A1B0GUT2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00959A0A1B0GUT2 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00959A0A1B0GUT2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC13.44□□□□□ -0.26
LINC00959A0A1B0GUT2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC13.44□□□□□ -0.26
LINC00959A0A1B0GUT2 AC011767.1-201ENST00000617410 1153 ntBASIC13.44□□□□□ -0.26
LINC00959A0A1B0GUT2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00959A0A1B0GUT2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00959A0A1B0GUT2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00959A0A1B0GUT2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
LINC00959A0A1B0GUT2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
LINC00959A0A1B0GUT2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00959A0A1B0GUT2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
LINC00959A0A1B0GUT2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC13.44□□□□□ -0.26
LINC00959A0A1B0GUT2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00959A0A1B0GUT2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00959A0A1B0GUT2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00959A0A1B0GUT2 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00959A0A1B0GUT2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00959A0A1B0GUT2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
LINC00959A0A1B0GUT2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00959A0A1B0GUT2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00959A0A1B0GUT2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00959A0A1B0GUT2 PHGDH-210ENST00000641115 1638 ntBASIC13.43□□□□□ -0.26
LINC00959A0A1B0GUT2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00959A0A1B0GUT2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00959A0A1B0GUT2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms