Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF103-CHMP3A0A140T963 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF103-CHMP3A0A140T963 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 AC005332.7-201ENST00000614046 2005 ntBASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 AC013268.1-206ENST00000638368 961 ntBASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 AC112229.1-201ENST00000639295 961 ntBASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 AC087633.2-202ENST00000565166 1439 ntBASIC19■□□□□ 0.63
RNF103-CHMP3A0A140T963 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF103-CHMP3A0A140T963 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF103-CHMP3A0A140T963 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF103-CHMP3A0A140T963 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF103-CHMP3A0A140T963 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF103-CHMP3A0A140T963 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF103-CHMP3A0A140T963 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF103-CHMP3A0A140T963 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF103-CHMP3A0A140T963 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF103-CHMP3A0A140T963 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF103-CHMP3A0A140T963 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF103-CHMP3A0A140T963 KRT18P5-201ENST00000436075 1291 ntBASIC18.99■□□□□ 0.63
RNF103-CHMP3A0A140T963 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.99■□□□□ 0.63
RNF103-CHMP3A0A140T963 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF103-CHMP3A0A140T963 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF103-CHMP3A0A140T963 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF103-CHMP3A0A140T963 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF103-CHMP3A0A140T963 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RNF103-CHMP3A0A140T963 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF103-CHMP3A0A140T963 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF103-CHMP3A0A140T963 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF103-CHMP3A0A140T963 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
RNF103-CHMP3A0A140T963 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF103-CHMP3A0A140T963 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF103-CHMP3A0A140T963 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF103-CHMP3A0A140T963 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF103-CHMP3A0A140T963 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF103-CHMP3A0A140T963 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF103-CHMP3A0A140T963 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF103-CHMP3A0A140T963 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF103-CHMP3A0A140T963 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF103-CHMP3A0A140T963 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF103-CHMP3A0A140T963 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.98■□□□□ 0.63
RNF103-CHMP3A0A140T963 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.98■□□□□ 0.63
RNF103-CHMP3A0A140T963 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF103-CHMP3A0A140T963 AC007322.4-201ENST00000509611 723 ntBASIC18.98■□□□□ 0.63
RNF103-CHMP3A0A140T963 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.98■□□□□ 0.63
RNF103-CHMP3A0A140T963 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.98■□□□□ 0.63
RNF103-CHMP3A0A140T963 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF103-CHMP3A0A140T963 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF103-CHMP3A0A140T963 AL356652.1-201ENST00000615962 565 ntBASIC18.98■□□□□ 0.63
RNF103-CHMP3A0A140T963 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF103-CHMP3A0A140T963 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RNF103-CHMP3A0A140T963 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF103-CHMP3A0A140T963 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF103-CHMP3A0A140T963 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RNF103-CHMP3A0A140T963 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF103-CHMP3A0A140T963 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
RNF103-CHMP3A0A140T963 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
RNF103-CHMP3A0A140T963 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF103-CHMP3A0A140T963 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
RNF103-CHMP3A0A140T963 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF103-CHMP3A0A140T963 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF103-CHMP3A0A140T963 CYP21A1P-202ENST00000354927 1481 ntBASIC18.97■□□□□ 0.63
RNF103-CHMP3A0A140T963 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF103-CHMP3A0A140T963 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF103-CHMP3A0A140T963 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF103-CHMP3A0A140T963 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF103-CHMP3A0A140T963 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RNF103-CHMP3A0A140T963 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF103-CHMP3A0A140T963 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF103-CHMP3A0A140T963 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms