Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.78□□□□□ -0.04
TRBV6-1A0A0K0K1D8 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-1A0A0K0K1D8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-1A0A0K0K1D8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-1A0A0K0K1D8 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TRBV6-1A0A0K0K1D8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-1A0A0K0K1D8 PHGDH-210ENST00000641115 1638 ntBASIC14.78□□□□□ -0.04
TRBV6-1A0A0K0K1D8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-1A0A0K0K1D8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-1A0A0K0K1D8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
TRBV6-1A0A0K0K1D8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-1A0A0K0K1D8 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-1A0A0K0K1D8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-1A0A0K0K1D8 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-1A0A0K0K1D8 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
TRBV6-1A0A0K0K1D8 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC14.78□□□□□ -0.04
TRBV6-1A0A0K0K1D8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-1A0A0K0K1D8 AL031432.3-201ENST00000607698 485 ntBASIC14.78□□□□□ -0.04
TRBV6-1A0A0K0K1D8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.78□□□□□ -0.04
TRBV6-1A0A0K0K1D8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
TRBV6-1A0A0K0K1D8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-1A0A0K0K1D8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-1A0A0K0K1D8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.78□□□□□ -0.04
TRBV6-1A0A0K0K1D8 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
TRBV6-1A0A0K0K1D8 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-1A0A0K0K1D8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-1A0A0K0K1D8 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.78□□□□□ -0.04
TRBV6-1A0A0K0K1D8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-1A0A0K0K1D8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV6-1A0A0K0K1D8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV6-1A0A0K0K1D8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.77□□□□□ -0.04
TRBV6-1A0A0K0K1D8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV6-1A0A0K0K1D8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV6-1A0A0K0K1D8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV6-1A0A0K0K1D8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV6-1A0A0K0K1D8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV6-1A0A0K0K1D8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC14.77□□□□□ -0.05
TRBV6-1A0A0K0K1D8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC14.77□□□□□ -0.05
TRBV6-1A0A0K0K1D8 HLA-G-202ENST00000376815 851 ntBASIC14.77□□□□□ -0.05
TRBV6-1A0A0K0K1D8 HLA-G-203ENST00000376818 1127 ntBASIC14.77□□□□□ -0.05
TRBV6-1A0A0K0K1D8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC14.77□□□□□ -0.05
TRBV6-1A0A0K0K1D8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC14.77□□□□□ -0.05
TRBV6-1A0A0K0K1D8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-1A0A0K0K1D8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-1A0A0K0K1D8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.77□□□□□ -0.05
TRBV6-1A0A0K0K1D8 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC14.77□□□□□ -0.05
TRBV6-1A0A0K0K1D8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
TRBV6-1A0A0K0K1D8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC14.77□□□□□ -0.05
TRBV6-1A0A0K0K1D8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-1A0A0K0K1D8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-1A0A0K0K1D8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC14.77□□□□□ -0.05
TRBV6-1A0A0K0K1D8 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-1A0A0K0K1D8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-1A0A0K0K1D8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-1A0A0K0K1D8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
TRBV6-1A0A0K0K1D8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TRBV6-1A0A0K0K1D8 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-1A0A0K0K1D8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-1A0A0K0K1D8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-1A0A0K0K1D8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-1A0A0K0K1D8 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-1A0A0K0K1D8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-1A0A0K0K1D8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 AC141586.3-201ENST00000562166 1838 ntBASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 AL161938.1-201ENST00000569833 2180 ntBASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 TESC-206ENST00000541210 936 ntTSL 3 BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 AC093525.10-201ENST00000625130 1569 ntBASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-1A0A0K0K1D8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
TRBV6-1A0A0K0K1D8 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-1A0A0K0K1D8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms