Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 FAM21FP-204ENST00000608637 956 ntBASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 HTR7P1-202ENST00000624664 4411 ntBASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 PGM5P4-201ENST00000421970 445 ntBASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 PLD4-205ENST00000553861 667 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 FGF8-207ENST00000618991 856 ntTSL 3 BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 MYCNOS-205ENST00000641950 531 ntBASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 AC004408.2-201ENST00000623613 2777 ntBASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-4A0A0B4J246 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 BID-203ENST00000399765 1879 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 AP005212.1-201ENST00000581547 1997 ntBASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 PARP1-202ENST00000366792 553 ntTSL 3 BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 AC091799.1-201ENST00000422823 811 ntBASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms