Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV10A0A0B4J240 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV10A0A0B4J240 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV10A0A0B4J240 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
TRAV10A0A0B4J240 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV10A0A0B4J240 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV10A0A0B4J240 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAV10A0A0B4J240 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV10A0A0B4J240 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV10A0A0B4J240 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TRAV10A0A0B4J240 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV10A0A0B4J240 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV10A0A0B4J240 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TRAV10A0A0B4J240 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
TRAV10A0A0B4J240 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV10A0A0B4J240 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV10A0A0B4J240 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV10A0A0B4J240 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV10A0A0B4J240 AP006587.1-201ENST00000534129 1502 ntBASIC13.96□□□□□ -0.17
TRAV10A0A0B4J240 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TRAV10A0A0B4J240 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV10A0A0B4J240 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV10A0A0B4J240 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.96□□□□□ -0.17
TRAV10A0A0B4J240 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV10A0A0B4J240 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV10A0A0B4J240 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV10A0A0B4J240 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV10A0A0B4J240 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TRAV10A0A0B4J240 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV10A0A0B4J240 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.96□□□□□ -0.17
TRAV10A0A0B4J240 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC13.96□□□□□ -0.17
TRAV10A0A0B4J240 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV10A0A0B4J240 CD177P1-201ENST00000606252 935 ntBASIC13.96□□□□□ -0.17
TRAV10A0A0B4J240 DECR2-212ENST00000627716 352 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV10A0A0B4J240 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV10A0A0B4J240 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV10A0A0B4J240 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
TRAV10A0A0B4J240 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC13.96□□□□□ -0.18
TRAV10A0A0B4J240 AC026310.3-201ENST00000625186 2373 ntBASIC13.96□□□□□ -0.18
TRAV10A0A0B4J240 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV10A0A0B4J240 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV10A0A0B4J240 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV10A0A0B4J240 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV10A0A0B4J240 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC13.96□□□□□ -0.18
TRAV10A0A0B4J240 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV10A0A0B4J240 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV10A0A0B4J240 BID-203ENST00000399765 1879 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV10A0A0B4J240 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRAV10A0A0B4J240 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRAV10A0A0B4J240 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV10A0A0B4J240 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV10A0A0B4J240 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV10A0A0B4J240 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
TRAV10A0A0B4J240 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.95□□□□□ -0.18
TRAV10A0A0B4J240 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC13.95□□□□□ -0.18
TRAV10A0A0B4J240 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV10A0A0B4J240 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC13.95□□□□□ -0.18
TRAV10A0A0B4J240 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.95□□□□□ -0.18
TRAV10A0A0B4J240 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.95□□□□□ -0.18
TRAV10A0A0B4J240 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV10A0A0B4J240 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV10A0A0B4J240 LINC01023-201ENST00000606054 436 ntBASIC13.95□□□□□ -0.18
TRAV10A0A0B4J240 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV10A0A0B4J240 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV10A0A0B4J240 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV10A0A0B4J240 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV10A0A0B4J240 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV10A0A0B4J240 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV10A0A0B4J240 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV10A0A0B4J240 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV10A0A0B4J240 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
TRAV10A0A0B4J240 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV10A0A0B4J240 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV10A0A0B4J240 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TRAV10A0A0B4J240 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV10A0A0B4J240 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV10A0A0B4J240 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV10A0A0B4J240 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV10A0A0B4J240 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV10A0A0B4J240 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV10A0A0B4J240 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV10A0A0B4J240 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
TRAV10A0A0B4J240 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV10A0A0B4J240 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TRAV10A0A0B4J240 RPS20-210ENST00000523936 899 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV10A0A0B4J240 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV10A0A0B4J240 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV10A0A0B4J240 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV10A0A0B4J240 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV10A0A0B4J240 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC13.94□□□□□ -0.18
TRAV10A0A0B4J240 AL353708.3-201ENST00000610272 989 ntBASIC13.94□□□□□ -0.18
TRAV10A0A0B4J240 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV10A0A0B4J240 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC13.94□□□□□ -0.18
TRAV10A0A0B4J240 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV10A0A0B4J240 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV10A0A0B4J240 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TRAV10A0A0B4J240 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV10A0A0B4J240 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV10A0A0B4J240 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms