Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 AC100791.3-201ENST00000617619 330 ntBASIC16.53■□□□□ 0.24
TRBV6-7A0A0A0MS04 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-7A0A0A0MS04 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.53■□□□□ 0.24
TRBV6-7A0A0A0MS04 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-7A0A0A0MS04 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-7A0A0A0MS04 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-7A0A0A0MS04 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TRBV6-7A0A0A0MS04 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-7A0A0A0MS04 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-7A0A0A0MS04 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.53■□□□□ 0.24
TRBV6-7A0A0A0MS04 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
TRBV6-7A0A0A0MS04 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-7A0A0A0MS04 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.53■□□□□ 0.24
TRBV6-7A0A0A0MS04 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.53■□□□□ 0.24
TRBV6-7A0A0A0MS04 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TRBV6-7A0A0A0MS04 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TRBV6-7A0A0A0MS04 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.52■□□□□ 0.24
TRBV6-7A0A0A0MS04 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV6-7A0A0A0MS04 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV6-7A0A0A0MS04 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV6-7A0A0A0MS04 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TRBV6-7A0A0A0MS04 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV6-7A0A0A0MS04 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TRBV6-7A0A0A0MS04 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.52■□□□□ 0.24
TRBV6-7A0A0A0MS04 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV6-7A0A0A0MS04 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV6-7A0A0A0MS04 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV6-7A0A0A0MS04 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.52■□□□□ 0.24
TRBV6-7A0A0A0MS04 AC034268.1-201ENST00000441047 882 ntBASIC16.52■□□□□ 0.24
TRBV6-7A0A0A0MS04 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV6-7A0A0A0MS04 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.52■□□□□ 0.24
TRBV6-7A0A0A0MS04 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.52■□□□□ 0.24
TRBV6-7A0A0A0MS04 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.52■□□□□ 0.24
TRBV6-7A0A0A0MS04 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.52■□□□□ 0.24
TRBV6-7A0A0A0MS04 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.52■□□□□ 0.24
TRBV6-7A0A0A0MS04 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV6-7A0A0A0MS04 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV6-7A0A0A0MS04 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
TRBV6-7A0A0A0MS04 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.52■□□□□ 0.24
TRBV6-7A0A0A0MS04 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.52■□□□□ 0.23
TRBV6-7A0A0A0MS04 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRBV6-7A0A0A0MS04 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRBV6-7A0A0A0MS04 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRBV6-7A0A0A0MS04 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
TRBV6-7A0A0A0MS04 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
TRBV6-7A0A0A0MS04 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRBV6-7A0A0A0MS04 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.52■□□□□ 0.23
TRBV6-7A0A0A0MS04 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRBV6-7A0A0A0MS04 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
TRBV6-7A0A0A0MS04 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRBV6-7A0A0A0MS04 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRBV6-7A0A0A0MS04 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.52■□□□□ 0.23
TRBV6-7A0A0A0MS04 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 MCRIP2P1-201ENST00000394346 511 ntBASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-7A0A0A0MS04 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV6-7A0A0A0MS04 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV6-7A0A0A0MS04 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV6-7A0A0A0MS04 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.5■□□□□ 0.23
TRBV6-7A0A0A0MS04 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV6-7A0A0A0MS04 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.5■□□□□ 0.23
TRBV6-7A0A0A0MS04 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.5■□□□□ 0.23
TRBV6-7A0A0A0MS04 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV6-7A0A0A0MS04 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV6-7A0A0A0MS04 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRBV6-7A0A0A0MS04 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRBV6-7A0A0A0MS04 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRBV6-7A0A0A0MS04 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV6-7A0A0A0MS04 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.5■□□□□ 0.23
TRBV6-7A0A0A0MS04 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms