Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 LL22NC03-63E9.3-201ENST00000407120 3111 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
PHF8Q9UPP1 FAM13C-215ENST00000614220 3388 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
PHF8Q9UPP1 LIG4-204ENST00000611712 4180 ntAPPRIS P1 TSL 4 BASIC10.46□□□□□ -0.74
PHF8Q9UPP1 ZNF791-201ENST00000343325 4554 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 POLR3B-202ENST00000539066 4118 ntTSL 2 BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 NUMA1-232ENST00000613205 3940 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 ZNF383-208ENST00000590503 1673 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 OR10D1P-201ENST00000355343 936 ntBASIC10.45□□□□□ -0.74
PHF8Q9UPP1 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 CAPNS1P1-201ENST00000401029 633 ntBASIC10.45□□□□□ -0.74
PHF8Q9UPP1 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 ZYG11AP1-201ENST00000430329 837 ntBASIC10.45□□□□□ -0.74
PHF8Q9UPP1 RPL23AP76-201ENST00000441860 458 ntBASIC10.45□□□□□ -0.74
PHF8Q9UPP1 PROX1-AS1-203ENST00000451396 476 ntTSL 5 BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 TDGF1P6-201ENST00000463873 448 ntBASIC10.45□□□□□ -0.74
PHF8Q9UPP1 AC005165.2-201ENST00000466070 380 ntBASIC10.45□□□□□ -0.74
PHF8Q9UPP1 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 RN7SKP141-201ENST00000516167 338 ntBASIC10.45□□□□□ -0.74
PHF8Q9UPP1 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 TSPAN8-203ENST00000546561 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 AC008147.3-201ENST00000548666 354 ntBASIC10.45□□□□□ -0.74
PHF8Q9UPP1 AC008127.2-201ENST00000549925 1075 ntBASIC10.45□□□□□ -0.74
PHF8Q9UPP1 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 AC068014.1-201ENST00000576836 413 ntTSL 3 BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 MIR4637-201ENST00000582405 84 ntBASIC10.45□□□□□ -0.74
PHF8Q9UPP1 AC060780.3-201ENST00000589464 80 ntBASIC10.45□□□□□ -0.74
PHF8Q9UPP1 SLC14A1-214ENST00000589700 1022 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 VN1R79P-201ENST00000593540 513 ntBASIC10.45□□□□□ -0.74
PHF8Q9UPP1 AC245407.2-201ENST00000614199 451 ntBASIC10.45□□□□□ -0.74
PHF8Q9UPP1 MIAT_exon1.1-201ENST00000617016 135 ntBASIC10.45□□□□□ -0.74
PHF8Q9UPP1 AC073569.3-201ENST00000619055 682 ntBASIC10.45□□□□□ -0.74
PHF8Q9UPP1 uc_338.37-201ENST00000620113 186 ntBASIC10.45□□□□□ -0.74
PHF8Q9UPP1 AC005355.2-201ENST00000625064 484 ntBASIC10.45□□□□□ -0.74
PHF8Q9UPP1 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 ARL11-201ENST00000282026 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 RPGR-202ENST00000339363 3686 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 ERMAP-203ENST00000372517 3423 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 TMOD1-203ENST00000395211 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 BTBD3-215ENST00000618918 4486 ntAPPRIS ALT1 TSL 4 BASIC10.45□□□□□ -0.74
PHF8Q9UPP1 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
PHF8Q9UPP1 AL049543.1-201ENST00000499525 2874 ntTSL 2 BASIC10.44□□□□□ -0.74
PHF8Q9UPP1 SLC8A1-206ENST00000406391 2814 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
PHF8Q9UPP1 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
PHF8Q9UPP1 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
PHF8Q9UPP1 ISX-201ENST00000308700 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PHF8Q9UPP1 PLEKHA5-215ENST00000539256 3357 ntTSL 2 BASIC10.44□□□□□ -0.74
PHF8Q9UPP1 RBPJP6-201ENST00000411556 1431 ntBASIC10.44□□□□□ -0.74
PHF8Q9UPP1 AC092111.2-201ENST00000611627 1414 ntBASIC10.44□□□□□ -0.74
PHF8Q9UPP1 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC10.44□□□□□ -0.74
PHF8Q9UPP1 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PHF8Q9UPP1 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
PHF8Q9UPP1 SAMMSON-203ENST00000641005 2168 ntBASIC10.44□□□□□ -0.74
PHF8Q9UPP1 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
PHF8Q9UPP1 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
PHF8Q9UPP1 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PHF8Q9UPP1 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PHF8Q9UPP1 NOX1-203ENST00000372964 661 ntTSL 2 BASIC10.44□□□□□ -0.74
PHF8Q9UPP1 RNU6-549P-201ENST00000384433 107 ntBASIC10.44□□□□□ -0.74
PHF8Q9UPP1 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
PHF8Q9UPP1 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
PHF8Q9UPP1 RPL23AP39-201ENST00000415533 405 ntBASIC10.44□□□□□ -0.74
PHF8Q9UPP1 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC10.44□□□□□ -0.74
PHF8Q9UPP1 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC10.44□□□□□ -0.74
PHF8Q9UPP1 DBIL5P2-201ENST00000443827 253 ntBASIC10.44□□□□□ -0.74
PHF8Q9UPP1 AL451074.4-201ENST00000447545 470 ntBASIC10.44□□□□□ -0.74
PHF8Q9UPP1 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC10.44□□□□□ -0.74
PHF8Q9UPP1 AC022336.1-201ENST00000475510 337 ntBASIC10.44□□□□□ -0.74
PHF8Q9UPP1 AC008629.3-201ENST00000505786 586 ntBASIC10.44□□□□□ -0.74
PHF8Q9UPP1 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC10.44□□□□□ -0.74
PHF8Q9UPP1 AC114786.4-201ENST00000508771 728 ntBASIC10.44□□□□□ -0.74
PHF8Q9UPP1 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC10.44□□□□□ -0.74
PHF8Q9UPP1 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC10.44□□□□□ -0.74
PHF8Q9UPP1 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC10.44□□□□□ -0.74
PHF8Q9UPP1 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC10.44□□□□□ -0.74
PHF8Q9UPP1 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC10.44□□□□□ -0.74
PHF8Q9UPP1 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC10.44□□□□□ -0.74
PHF8Q9UPP1 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC10.44□□□□□ -0.74
PHF8Q9UPP1 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC10.44□□□□□ -0.74
PHF8Q9UPP1 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC10.44□□□□□ -0.74
PHF8Q9UPP1 MIR3680-2-201ENST00000578247 87 ntBASIC10.44□□□□□ -0.74
PHF8Q9UPP1 OR4K7P-201ENST00000580232 945 ntBASIC10.44□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms