Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.15□□□□□ -1.27
SSU72Q9NP77 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
SSU72Q9NP77 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SSU72Q9NP77 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
SSU72Q9NP77 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SSU72Q9NP77 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SSU72Q9NP77 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SSU72Q9NP77 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.15□□□□□ -1.27
SSU72Q9NP77 AC011592.1-201ENST00000624647 3634 ntBASIC7.15□□□□□ -1.27
SSU72Q9NP77 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
SSU72Q9NP77 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.27
SSU72Q9NP77 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SSU72Q9NP77 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.15□□□□□ -1.27
SSU72Q9NP77 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.15□□□□□ -1.27
SSU72Q9NP77 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SSU72Q9NP77 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SSU72Q9NP77 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SSU72Q9NP77 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SSU72Q9NP77 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SSU72Q9NP77 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SSU72Q9NP77 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 PPCS-201ENST00000372556 984 ntTSL 2 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 PPCS-204ENST00000372562 966 ntTSL 2 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SSU72Q9NP77 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SSU72Q9NP77 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 RNU6-1055P-201ENST00000391085 107 ntBASIC7.14□□□□□ -1.27
SSU72Q9NP77 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 AC092952.1-201ENST00000397646 1209 ntBASIC7.14□□□□□ -1.27
SSU72Q9NP77 MIR541-201ENST00000401360 84 ntBASIC7.14□□□□□ -1.27
SSU72Q9NP77 KRT18P52-201ENST00000404956 846 ntBASIC7.14□□□□□ -1.27
SSU72Q9NP77 RNU2-17P-201ENST00000410290 190 ntBASIC7.14□□□□□ -1.27
SSU72Q9NP77 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 CENPIP1-201ENST00000425713 902 ntBASIC7.14□□□□□ -1.27
SSU72Q9NP77 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SSU72Q9NP77 RPL26P34-201ENST00000431005 451 ntBASIC7.14□□□□□ -1.27
SSU72Q9NP77 MRPS10P2-201ENST00000431226 381 ntBASIC7.14□□□□□ -1.27
SSU72Q9NP77 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
SSU72Q9NP77 AP1B1P1-202ENST00000448124 191 ntBASIC7.14□□□□□ -1.27
SSU72Q9NP77 AC013264.1-201ENST00000449346 455 ntTSL 2 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 AURKAPS1-201ENST00000451805 1212 ntBASIC7.14□□□□□ -1.27
SSU72Q9NP77 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 CEACAMP11-201ENST00000455211 583 ntBASIC7.14□□□□□ -1.27
SSU72Q9NP77 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 AC135721.2-201ENST00000464237 300 ntBASIC7.14□□□□□ -1.27
SSU72Q9NP77 RN7SL414P-201ENST00000469545 294 ntBASIC7.14□□□□□ -1.27
SSU72Q9NP77 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SSU72Q9NP77 AC063943.2-201ENST00000495697 534 ntBASIC7.14□□□□□ -1.27
SSU72Q9NP77 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 AC127070.3-201ENST00000503695 3263 ntBASIC7.14□□□□□ -1.27
SSU72Q9NP77 PGAM4P2-201ENST00000512491 721 ntBASIC7.14□□□□□ -1.27
SSU72Q9NP77 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 RNU6-1178P-201ENST00000516674 107 ntBASIC7.14□□□□□ -1.27
SSU72Q9NP77 AC012574.1-201ENST00000523874 252 ntTSL 5 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 AP001124.1-201ENST00000529628 385 ntBASIC7.14□□□□□ -1.27
SSU72Q9NP77 DEFB130C-202ENST00000530001 230 ntBASIC7.14□□□□□ -1.27
SSU72Q9NP77 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 AP000619.1-201ENST00000540293 1000 ntBASIC7.14□□□□□ -1.27
SSU72Q9NP77 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 AL591767.3-201ENST00000554632 525 ntBASIC7.14□□□□□ -1.27
SSU72Q9NP77 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 AC010547.7-201ENST00000570323 333 ntBASIC7.14□□□□□ -1.27
SSU72Q9NP77 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
SSU72Q9NP77 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SSU72Q9NP77 VN1R83P-201ENST00000595685 445 ntBASIC7.14□□□□□ -1.27
SSU72Q9NP77 RN7SL3-201ENST00000610674 299 ntBASIC7.14□□□□□ -1.27
SSU72Q9NP77 PROX1-AS1-221ENST00000615085 673 ntTSL 5 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 AL162574.1-201ENST00000615702 950 ntBASIC7.14□□□□□ -1.27
SSU72Q9NP77 PDCD6IPP1-202ENST00000622242 1064 ntBASIC7.14□□□□□ -1.27
SSU72Q9NP77 AC024595.1-201ENST00000623088 387 ntBASIC7.14□□□□□ -1.27
SSU72Q9NP77 AC093648.1-201ENST00000623546 606 ntBASIC7.14□□□□□ -1.27
SSU72Q9NP77 AC105114.1-201ENST00000624795 1862 ntBASIC7.14□□□□□ -1.27
SSU72Q9NP77 AL158175.1-201ENST00000634327 1127 ntTSL 5 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
SSU72Q9NP77 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SSU72Q9NP77 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SSU72Q9NP77 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.14□□□□□ -1.27
SSU72Q9NP77 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
SSU72Q9NP77 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.13□□□□□ -1.27
SSU72Q9NP77 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SSU72Q9NP77 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.13□□□□□ -1.27
SSU72Q9NP77 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms