Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 PABPC1P1-201ENST00000506347 591 ntBASIC6.67□□□□□ -1.34
NUP43Q8NFH3 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 ULK4P1-202ENST00000565174 503 ntBASIC6.67□□□□□ -1.34
NUP43Q8NFH3 AC023827.2-201ENST00000566880 1061 ntBASIC6.67□□□□□ -1.34
NUP43Q8NFH3 AC095057.3-201ENST00000567102 1157 ntBASIC6.67□□□□□ -1.34
NUP43Q8NFH3 CBX3P2-202ENST00000583365 535 ntBASIC6.67□□□□□ -1.34
NUP43Q8NFH3 STARD6-204ENST00000584040 660 ntTSL 3 BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 AC006116.6-201ENST00000593258 1103 ntBASIC6.67□□□□□ -1.34
NUP43Q8NFH3 AC078795.2-201ENST00000602835 1252 ntBASIC6.67□□□□□ -1.34
NUP43Q8NFH3 AC072039.2-201ENST00000608883 439 ntBASIC6.67□□□□□ -1.34
NUP43Q8NFH3 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 AC130448.2-201ENST00000624082 374 ntBASIC6.67□□□□□ -1.34
NUP43Q8NFH3 AC010608.2-201ENST00000624830 470 ntBASIC6.67□□□□□ -1.34
NUP43Q8NFH3 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 MFSD8-256ENST00000641949 1640 ntBASIC6.67□□□□□ -1.34
NUP43Q8NFH3 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 AC092451.3-201ENST00000625067 1343 ntBASIC6.67□□□□□ -1.34
NUP43Q8NFH3 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 ZNF710-AS1-202ENST00000620791 2133 ntBASIC6.67□□□□□ -1.34
NUP43Q8NFH3 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NUP43Q8NFH3 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 RNU6-224P-201ENST00000384055 107 ntBASIC6.66□□□□□ -1.34
NUP43Q8NFH3 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 Y_RNA.578-201ENST00000390903 88 ntBASIC6.66□□□□□ -1.34
NUP43Q8NFH3 RAB5CP1-201ENST00000395972 580 ntBASIC6.66□□□□□ -1.34
NUP43Q8NFH3 RN7SKP85-201ENST00000411349 318 ntBASIC6.66□□□□□ -1.34
NUP43Q8NFH3 AL773545.3-201ENST00000414297 706 ntBASIC6.66□□□□□ -1.34
NUP43Q8NFH3 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 RBM22P7-201ENST00000421321 280 ntBASIC6.66□□□□□ -1.34
NUP43Q8NFH3 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 RPS27P5-201ENST00000444247 244 ntBASIC6.66□□□□□ -1.34
NUP43Q8NFH3 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 BUD31P2-201ENST00000449374 300 ntBASIC6.66□□□□□ -1.34
NUP43Q8NFH3 AL034399.1-201ENST00000451535 380 ntBASIC6.66□□□□□ -1.34
NUP43Q8NFH3 AC097262.1-201ENST00000452559 548 ntBASIC6.66□□□□□ -1.34
NUP43Q8NFH3 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 RPS4XP23-201ENST00000487801 237 ntBASIC6.66□□□□□ -1.34
NUP43Q8NFH3 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 RNU6-759P-201ENST00000516740 103 ntBASIC6.66□□□□□ -1.34
NUP43Q8NFH3 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 PDCL2P2-201ENST00000533651 189 ntBASIC6.66□□□□□ -1.34
NUP43Q8NFH3 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 GARSP1-201ENST00000570895 719 ntBASIC6.66□□□□□ -1.34
NUP43Q8NFH3 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 AC022069.1-201ENST00000582910 658 ntBASIC6.66□□□□□ -1.34
NUP43Q8NFH3 AC015688.2-201ENST00000584523 262 ntBASIC6.66□□□□□ -1.34
NUP43Q8NFH3 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 PRR13P5-201ENST00000596581 442 ntBASIC6.66□□□□□ -1.34
NUP43Q8NFH3 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 AL031985.2-201ENST00000600955 480 ntBASIC6.66□□□□□ -1.34
NUP43Q8NFH3 AL591222.2-201ENST00000604443 754 ntBASIC6.66□□□□□ -1.34
NUP43Q8NFH3 AL049840.6-201ENST00000604583 345 ntBASIC6.66□□□□□ -1.34
NUP43Q8NFH3 AC016877.3-201ENST00000606778 504 ntBASIC6.66□□□□□ -1.34
NUP43Q8NFH3 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 AC019080.5-201ENST00000624891 757 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms