RNA–Protein interactions for RNA: ENST00000583365.1

CBX3P2-202, Transcript of chromobox 3 pseudogene 2, humanhuman

BASIC

Gene CBX3P2, Length 535 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P2-202ENST00000583365 AEBP2Q6ZN18 517 aaPredicted RBP25.31■■□□□ 1.64
CBX3P2-202ENST00000583365 CHIC1Q5VXU3 224 aa24.45■■□□□ 1.5
CBX3P2-202ENST00000583365 SENP3Q9H4L4 574 aaPredicted RBP21.65■■□□□ 1.06
CBX3P2-202ENST00000583365 PHF23Q9BUL5 403 aaPredicted RBP21.39■■□□□ 1.01
CBX3P2-202ENST00000583365 FOXD1Q16676 465 aa20.05■□□□□ 0.8
CBX3P2-202ENST00000583365 PLPPR3Q6T4P5 718 aa19.73■□□□□ 0.75
CBX3P2-202ENST00000583365 PPP6R1Q9UPN7 881 aa18.96■□□□□ 0.63
CBX3P2-202ENST00000583365 ADRA2BP18089 450 aa18.94■□□□□ 0.62
CBX3P2-202ENST00000583365 PIAS4Q8N2W9 510 aaPredicted RBP18.88■□□□□ 0.61
CBX3P2-202ENST00000583365 MSH5O43196 834 aa18.74■□□□□ 0.59
CBX3P2-202ENST00000583365 POTEDQ86YR6 584 aa17.61■□□□□ 0.41
CBX3P2-202ENST00000583365 SCAF1Q9H7N4 1312 aaKnown RBP17.47■□□□□ 0.39
CBX3P2-202ENST00000583365 PPP4R3CPQ6ZMV5 832 aa17.3■□□□□ 0.36
CBX3P2-202ENST00000583365 MAPK8IP2Q13387 824 aaPredicted RBP17.26■□□□□ 0.35
CBX3P2-202ENST00000583365 DMRT2Q9Y5R5 561 aa17.21■□□□□ 0.35
CBX3P2-202ENST00000583365 CNKSR2Q8WXI2 1034 aa16.94■□□□□ 0.3
CBX3P2-202ENST00000583365 NCBP3Q53F19 620 aaKnown RBP16.82■□□□□ 0.28
CBX3P2-202ENST00000583365 HOXD11P31277 338 aaPredicted RBP16.7■□□□□ 0.26
CBX3P2-202ENST00000583365 RNF216Q9NWF9 866 aaPredicted RBP16.69■□□□□ 0.26
CBX3P2-202ENST00000583365 NPM3O75607 178 aaKnown RBP16.49■□□□□ 0.23
CBX3P2-202ENST00000583365 DCAF8L1A6NGE4 600 aa16.46■□□□□ 0.23
CBX3P2-202ENST00000583365 KCNA4P22459 653 aa16.45■□□□□ 0.22
CBX3P2-202ENST00000583365 DNAJC5BQ9UF47 199 aa16.14■□□□□ 0.17
CBX3P2-202ENST00000583365 RNF39Q9H2S5 420 aa15.97■□□□□ 0.15
CBX3P2-202ENST00000583365 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.92■□□□□ 0.14
CBX3P2-202ENST00000583365 CACNB1Q02641 598 aaPredicted RBP15.81■□□□□ 0.12
CBX3P2-202ENST00000583365 C1QBPQ07021 282 aaKnown RBP15.79■□□□□ 0.12
CBX3P2-202ENST00000583365 SLC4A1APQ9BWU0 796 aaKnown RBP15.65■□□□□ 0.1
CBX3P2-202ENST00000583365 SLC4A2P04920 1241 aa15.62■□□□□ 0.09
CBX3P2-202ENST00000583365 U3KPZ7 1027 aaPredicted RBP15.59■□□□□ 0.09
CBX3P2-202ENST00000583365 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.39■□□□□ 0.05
CBX3P2-202ENST00000583365 HNRNPUL2Q1KMD3 747 aaKnown RBP15.39■□□□□ 0.05
CBX3P2-202ENST00000583365 APLP2Q06481 763 aa15.35■□□□□ 0.05
CBX3P2-202ENST00000583365 FOXD4L1Q9NU39 408 aa15.32■□□□□ 0.04
CBX3P2-202ENST00000583365 MYCNP04198 464 aaPredicted RBP15.31■□□□□ 0.04
CBX3P2-202ENST00000583365 SAMD1Q6SPF0 538 aaPredicted RBP15.29■□□□□ 0.04
CBX3P2-202ENST00000583365 CAPN15O75808 1086 aa15.24■□□□□ 0.03
CBX3P2-202ENST00000583365 SPINK5Q9NQ38 1064 aaPredicted RBP15.23■□□□□ 0.03
CBX3P2-202ENST00000583365 ZNF219Q9P2Y4 722 aaPredicted RBP15.13■□□□□ 0.01
CBX3P2-202ENST00000583365 ZBTB22O15209 634 aa15.1■□□□□ 0.01
CBX3P2-202ENST00000583365 TRHP20396 242 aaPredicted RBP15.06■□□□□ 0
CBX3P2-202ENST00000583365 DSG3P32926 999 aa15.06■□□□□ 0
CBX3P2-202ENST00000583365 EHMT2Q96KQ7 1210 aa15.02■□□□□ -0
CBX3P2-202ENST00000583365 ABCB7O75027 752 aa14.89□□□□□ -0.03
CBX3P2-202ENST00000583365 ATXN8OSP0DMR3 200 aa14.85□□□□□ -0.03
CBX3P2-202ENST00000583365 ATF5Q9Y2D1 282 aaPredicted RBP14.8□□□□□ -0.04
CBX3P2-202ENST00000583365 POLA2Q14181 598 aa14.73□□□□□ -0.05
CBX3P2-202ENST00000583365 CSRNP3Q8WYN3 585 aa14.73□□□□□ -0.05
CBX3P2-202ENST00000583365 ZBTB12Q9Y330 459 aaPredicted RBP14.59□□□□□ -0.07
CBX3P2-202ENST00000583365 RBM42Q9BTD8 480 aaKnown RBP14.45□□□□□ -0.1
CBX3P2-202ENST00000583365 FBLN2P98095 1184 aa14.34□□□□□ -0.11
CBX3P2-202ENST00000583365 OSCARQ8IYS5 282 aa14.26□□□□□ -0.13
CBX3P2-202ENST00000583365 MKRN4PQ13434 485 aaPredicted RBP14.16□□□□□ -0.14
CBX3P2-202ENST00000583365 AKT1S1Q96B36 256 aa14.16□□□□□ -0.14
CBX3P2-202ENST00000583365 SPDYE2BA6NHP3 402 aa14.11□□□□□ -0.15
CBX3P2-202ENST00000583365 SPDYE6P0CI01 402 aa14.11□□□□□ -0.15
CBX3P2-202ENST00000583365 SPDYE2Q495Y8 402 aa14.11□□□□□ -0.15
CBX3P2-202ENST00000583365 REM2Q8IYK8 340 aaPredicted RBP13.97□□□□□ -0.17
CBX3P2-202ENST00000583365 ZNF692Q9BU19 519 aaPredicted RBP13.96□□□□□ -0.17
CBX3P2-202ENST00000583365 SSUH2Q9Y2M2 353 aa13.94□□□□□ -0.18
CBX3P2-202ENST00000583365 CHRDL2Q6WN34 429 aa13.92□□□□□ -0.18
CBX3P2-202ENST00000583365 POTEHQ6S545 545 aa13.9□□□□□ -0.18
CBX3P2-202ENST00000583365 PITPNM1O00562 1244 aa13.83□□□□□ -0.2
CBX3P2-202ENST00000583365 SPDYE1Q8NFV5 336 aaPredicted RBP13.79□□□□□ -0.2
CBX3P2-202ENST00000583365 PABPN1Q86U42 306 aaKnown RBP eCLIP13.75□□□□□ -0.21
CBX3P2-202ENST00000583365 SPDYE4A6NLX3 237 aa13.73□□□□□ -0.21
CBX3P2-202ENST00000583365 CLEC11AQ9Y240 323 aa13.69□□□□□ -0.22
CBX3P2-202ENST00000583365 PIP4P2Q8N4L2 257 aa13.66□□□□□ -0.22
CBX3P2-202ENST00000583365 FXR2P51116 673 aaKnown RBP eCLIP13.64□□□□□ -0.23
CBX3P2-202ENST00000583365 PRR29P0C7W0 189 aa13.53□□□□□ -0.24
CBX3P2-202ENST00000583365 STAG3Q9UJ98 1225 aa13.53□□□□□ -0.24
CBX3P2-202ENST00000583365 PRKAR2AP13861 404 aaKnown RBP13.48□□□□□ -0.25
CBX3P2-202ENST00000583365 PROM2Q8N271 834 aa13.46□□□□□ -0.25
CBX3P2-202ENST00000583365 FKBP8Q14318 412 aa13.38□□□□□ -0.27
CBX3P2-202ENST00000583365 CHADLQ6NUI6 762 aa13.35□□□□□ -0.27
CBX3P2-202ENST00000583365 HAX1O00165 279 aa13.31□□□□□ -0.28
CBX3P2-202ENST00000583365 CREBZFQ9NS37 354 aa13.25□□□□□ -0.29
CBX3P2-202ENST00000583365 FARP1Q9Y4F1 1045 aaPredicted RBP13.23□□□□□ -0.29
CBX3P2-202ENST00000583365 SP7Q8TDD2 431 aaPredicted RBP13.2□□□□□ -0.3
CBX3P2-202ENST00000583365 C19orf67A6NJJ6 358 aa13.19□□□□□ -0.3
CBX3P2-202ENST00000583365 PLEKHG5O94827 1062 aa13.11□□□□□ -0.31
CBX3P2-202ENST00000583365 NPM1P06748 294 aaKnown RBP eCLIP13.09□□□□□ -0.31
CBX3P2-202ENST00000583365 FBXO3Q9UK99 471 aa13.09□□□□□ -0.31
CBX3P2-202ENST00000583365 CD44P16070 742 aaKnown RBP13.08□□□□□ -0.32
CBX3P2-202ENST00000583365 EVX2Q03828 476 aa13.08□□□□□ -0.32
CBX3P2-202ENST00000583365 MNX1P50219 401 aaPredicted RBP13.05□□□□□ -0.32
CBX3P2-202ENST00000583365 MIER1Q8N108 512 aa13.05□□□□□ -0.32
CBX3P2-202ENST00000583365 PLCD3Q8N3E9 789 aa13.02□□□□□ -0.33
CBX3P2-202ENST00000583365 RTN4Q9NQC3 1192 aaKnown RBP13.02□□□□□ -0.33
CBX3P2-202ENST00000583365 AMER1Q5JTC6 1135 aaPredicted RBP13□□□□□ -0.33
CBX3P2-202ENST00000583365 PAK3O75914 559 aaPredicted RBP12.99□□□□□ -0.33
CBX3P2-202ENST00000583365 ZBTB47Q9UFB7 747 aaPredicted RBP12.97□□□□□ -0.33
CBX3P2-202ENST00000583365 ZRANB1Q9UGI0 708 aa12.94□□□□□ -0.34
CBX3P2-202ENST00000583365 CLCN6P51797 869 aa12.93□□□□□ -0.34
CBX3P2-202ENST00000583365 ZNF579Q8NAF0 562 aaKnown RBP12.92□□□□□ -0.34
CBX3P2-202ENST00000583365 GABBR2O75899 941 aa12.88□□□□□ -0.35
CBX3P2-202ENST00000583365 VASPP50552 380 aaPredicted RBP12.87□□□□□ -0.35
CBX3P2-202ENST00000583365 TSPYL2Q9H2G4 693 aaPredicted RBP12.79□□□□□ -0.36
CBX3P2-202ENST00000583365 RASEFQ8IZ41 740 aa12.76□□□□□ -0.37
CBX3P2-202ENST00000583365 PHF12Q96QT6 1004 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms