Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7.3□□□□□ -1.24
COL1A1P02452 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
COL1A1P02452 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL1A1P02452 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.3□□□□□ -1.24
COL1A1P02452 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL1A1P02452 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
COL1A1P02452 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL1A1P02452 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL1A1P02452 MARK2P4-201ENST00000503381 2380 ntBASIC7.3□□□□□ -1.24
COL1A1P02452 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL1A1P02452 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
COL1A1P02452 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.3□□□□□ -1.24
COL1A1P02452 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL1A1P02452 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
COL1A1P02452 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL1A1P02452 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL1A1P02452 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC7.3□□□□□ -1.24
COL1A1P02452 OR3A2-201ENST00000408891 1076 ntBASIC7.3□□□□□ -1.24
COL1A1P02452 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7.3□□□□□ -1.24
COL1A1P02452 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL1A1P02452 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.3□□□□□ -1.24
COL1A1P02452 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.3□□□□□ -1.24
COL1A1P02452 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC7.3□□□□□ -1.24
COL1A1P02452 AL356801.1-201ENST00000559320 294 ntBASIC7.3□□□□□ -1.24
COL1A1P02452 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.3□□□□□ -1.24
COL1A1P02452 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
COL1A1P02452 OR8G3P-202ENST00000641572 1255 ntBASIC7.3□□□□□ -1.24
COL1A1P02452 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL1A1P02452 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL1A1P02452 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL1A1P02452 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL1A1P02452 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL1A1P02452 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
COL1A1P02452 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.29□□□□□ -1.24
COL1A1P02452 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC7.29□□□□□ -1.24
COL1A1P02452 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL1A1P02452 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL1A1P02452 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL1A1P02452 AP003175.1-201ENST00000641383 6658 ntBASIC7.29□□□□□ -1.24
COL1A1P02452 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL1A1P02452 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL1A1P02452 AMELX-201ENST00000348912 737 ntTSL 5 BASIC7.29□□□□□ -1.24
COL1A1P02452 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
COL1A1P02452 OR10R3P-201ENST00000361688 942 ntBASIC7.29□□□□□ -1.24
COL1A1P02452 AL353626.3-201ENST00000413399 657 ntBASIC7.29□□□□□ -1.24
COL1A1P02452 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC7.29□□□□□ -1.24
COL1A1P02452 BX119321.1-201ENST00000428912 797 ntBASIC7.29□□□□□ -1.24
COL1A1P02452 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC7.29□□□□□ -1.24
COL1A1P02452 AC114728.1-201ENST00000488289 483 ntBASIC7.29□□□□□ -1.24
COL1A1P02452 COX6B1P2-201ENST00000489624 230 ntBASIC7.29□□□□□ -1.24
COL1A1P02452 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC7.29□□□□□ -1.24
COL1A1P02452 AC008429.4-201ENST00000521201 182 ntBASIC7.29□□□□□ -1.24
COL1A1P02452 WBP1LP3-201ENST00000523033 208 ntBASIC7.29□□□□□ -1.24
COL1A1P02452 AC016180.1-201ENST00000567945 403 ntBASIC7.29□□□□□ -1.24
COL1A1P02452 AC119403.2-201ENST00000590960 598 ntBASIC7.29□□□□□ -1.24
COL1A1P02452 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL1A1P02452 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
COL1A1P02452 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.29□□□□□ -1.24
COL1A1P02452 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
COL1A1P02452 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL1A1P02452 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
COL1A1P02452 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.28□□□□□ -1.24
COL1A1P02452 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL1A1P02452 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL1A1P02452 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC7.28□□□□□ -1.24
COL1A1P02452 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL1A1P02452 TTC3P1-201ENST00000399586 6081 ntBASIC7.28□□□□□ -1.24
COL1A1P02452 FUNDC2P3-201ENST00000334716 533 ntBASIC7.28□□□□□ -1.24
COL1A1P02452 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL1A1P02452 PTCD2P2-201ENST00000415579 1095 ntBASIC7.28□□□□□ -1.24
COL1A1P02452 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.28□□□□□ -1.24
COL1A1P02452 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.28□□□□□ -1.24
COL1A1P02452 RPL34P3-201ENST00000421454 338 ntBASIC7.28□□□□□ -1.24
COL1A1P02452 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC7.28□□□□□ -1.24
COL1A1P02452 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7.28□□□□□ -1.24
COL1A1P02452 AC104164.1-201ENST00000460282 590 ntBASIC7.28□□□□□ -1.24
COL1A1P02452 AL157777.1-201ENST00000468100 304 ntBASIC7.28□□□□□ -1.24
COL1A1P02452 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL1A1P02452 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC7.28□□□□□ -1.24
COL1A1P02452 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.28□□□□□ -1.24
COL1A1P02452 AC110056.1-201ENST00000525759 911 ntBASIC7.28□□□□□ -1.24
COL1A1P02452 MYL6-213ENST00000549017 502 ntTSL 3 BASIC7.28□□□□□ -1.24
COL1A1P02452 GNG2-208ENST00000554875 430 ntTSL 5 BASIC7.28□□□□□ -1.24
COL1A1P02452 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.28□□□□□ -1.24
COL1A1P02452 MIR4301-201ENST00000577203 66 ntBASIC7.28□□□□□ -1.24
COL1A1P02452 AC015802.2-201ENST00000589690 189 ntBASIC7.28□□□□□ -1.24
COL1A1P02452 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.28□□□□□ -1.24
COL1A1P02452 RBPJP7-201ENST00000442803 1447 ntBASIC7.28□□□□□ -1.24
COL1A1P02452 RBPJP5-201ENST00000449433 1447 ntBASIC7.28□□□□□ -1.24
COL1A1P02452 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL1A1P02452 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL1A1P02452 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL1A1P02452 AL359091.1-201ENST00000449048 1734 ntBASIC7.28□□□□□ -1.24
COL1A1P02452 AC078880.4-201ENST00000617627 1749 ntBASIC7.28□□□□□ -1.24
COL1A1P02452 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL1A1P02452 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
COL1A1P02452 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL1A1P02452 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL1A1P02452 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL1A1P02452 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms