Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
USH2AO75445 RNA5SP30-201ENST00000365552 115 ntBASIC2.57□□□□□ -2
USH2AO75445 AC069213.2-201ENST00000420238 366 ntBASIC2.57□□□□□ -2
USH2AO75445 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 RN7SL51P-201ENST00000468230 285 ntBASIC2.57□□□□□ -2
USH2AO75445 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC2.57□□□□□ -2
USH2AO75445 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
USH2AO75445 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.57□□□□□ -2
USH2AO75445 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 RPL26P30-202ENST00000602923 645 ntBASIC2.57□□□□□ -2
USH2AO75445 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
USH2AO75445 SEMA6D-204ENST00000358066 5913 ntTSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC2.57□□□□□ -2
USH2AO75445 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC2.57□□□□□ -2
USH2AO75445 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC2.57□□□□□ -2
USH2AO75445 MIPEPP2-201ENST00000422560 1819 ntBASIC2.57□□□□□ -2
USH2AO75445 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC2.57□□□□□ -2
USH2AO75445 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC2.57□□□□□ -2
USH2AO75445 AF131215.2-201ENST00000531549 1710 ntBASIC2.57□□□□□ -2
USH2AO75445 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
USH2AO75445 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
USH2AO75445 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC2.57□□□□□ -2
USH2AO75445 MICAL2-203ENST00000379612 6625 ntTSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
USH2AO75445 RNU1-43P-201ENST00000365052 165 ntBASIC2.57□□□□□ -2
USH2AO75445 RNU1-77P-201ENST00000390868 162 ntBASIC2.57□□□□□ -2
USH2AO75445 RPL32P23-201ENST00000397237 405 ntBASIC2.57□□□□□ -2
USH2AO75445 GPS2P1-201ENST00000411761 986 ntBASIC2.57□□□□□ -2
USH2AO75445 AL390774.1-201ENST00000411924 246 ntBASIC2.57□□□□□ -2
USH2AO75445 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC2.57□□□□□ -2
USH2AO75445 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC2.57□□□□□ -2
USH2AO75445 AL139415.1-201ENST00000424862 352 ntBASIC2.57□□□□□ -2
USH2AO75445 AC126120.1-201ENST00000431082 470 ntBASIC2.57□□□□□ -2
USH2AO75445 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.57□□□□□ -2
USH2AO75445 AC073594.1-201ENST00000462065 364 ntBASIC2.57□□□□□ -2
USH2AO75445 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC2.57□□□□□ -2
USH2AO75445 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC2.57□□□□□ -2
USH2AO75445 AC015720.2-201ENST00000567709 334 ntBASIC2.57□□□□□ -2
USH2AO75445 RBM22P1-201ENST00000578589 1214 ntBASIC2.57□□□□□ -2
USH2AO75445 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.57□□□□□ -2
USH2AO75445 MIR7159-201ENST00000620587 66 ntBASIC2.57□□□□□ -2
USH2AO75445 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC2.57□□□□□ -2
USH2AO75445 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC2.57□□□□□ -2
USH2AO75445 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC2.57□□□□□ -2
USH2AO75445 ARPC5-202ENST00000359856 7209 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 IRF5P1-201ENST00000504852 2164 ntBASIC2.57□□□□□ -2
USH2AO75445 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC2.57□□□□□ -2
USH2AO75445 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC2.57□□□□□ -2
USH2AO75445 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
USH2AO75445 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC2.57□□□□□ -2
USH2AO75445 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC2.57□□□□□ -2
USH2AO75445 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC2.57□□□□□ -2
USH2AO75445 AC106730.2-201ENST00000566641 540 ntBASIC2.57□□□□□ -2
USH2AO75445 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC2.57□□□□□ -2
USH2AO75445 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC2.57□□□□□ -2
USH2AO75445 OR1N1-202ENST00000619659 939 ntBASIC2.57□□□□□ -2
USH2AO75445 AL359757.1-201ENST00000623176 255 ntBASIC2.57□□□□□ -2
USH2AO75445 SAMMSON-209ENST00000641222 1100 ntBASIC2.57□□□□□ -2
USH2AO75445 ST3GAL1-207ENST00000521180 6951 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
USH2AO75445 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 SLF2-201ENST00000238961 7288 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC2.57□□□□□ -2
USH2AO75445 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC2.57□□□□□ -2
USH2AO75445 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC2.57□□□□□ -2
USH2AO75445 ABHD18-201ENST00000388795 5450 ntTSL 5 BASIC2.57□□□□□ -2
USH2AO75445 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
USH2AO75445 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
USH2AO75445 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 POLR2J4-202ENST00000427076 6466 ntTSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC2.57□□□□□ -2
USH2AO75445 SCRN1-206ENST00000426154 5275 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
USH2AO75445 CRP-204ENST00000368112 787 ntTSL 2 BASIC2.56□□□□□ -2
USH2AO75445 RNU6-398P-201ENST00000384143 109 ntBASIC2.56□□□□□ -2
USH2AO75445 AL590240.2-201ENST00000413370 894 ntBASIC2.56□□□□□ -2
USH2AO75445 AC008280.1-201ENST00000418851 412 ntBASIC2.56□□□□□ -2
USH2AO75445 AC006946.1-201ENST00000429106 328 ntBASIC2.56□□□□□ -2
USH2AO75445 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 AC023424.1-201ENST00000496058 459 ntBASIC2.56□□□□□ -2
USH2AO75445 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC2.56□□□□□ -2
USH2AO75445 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC2.56□□□□□ -2
USH2AO75445 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC2.56□□□□□ -2
USH2AO75445 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC2.56□□□□□ -2
USH2AO75445 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms