Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC107954.1-201ENST00000565906 727 ntBASIC8.82□□□□□ -1
LRCH3Q96II8 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC8.82□□□□□ -1
LRCH3Q96II8 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC8.82□□□□□ -1
LRCH3Q96II8 AC007621.1-201ENST00000604544 437 ntBASIC8.82□□□□□ -1
LRCH3Q96II8 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC8.82□□□□□ -1
LRCH3Q96II8 AL109936.2-201ENST00000605350 650 ntBASIC8.82□□□□□ -1
LRCH3Q96II8 AL603758.1-201ENST00000618654 241 ntBASIC8.82□□□□□ -1
LRCH3Q96II8 AC136475.10-201ENST00000620253 385 ntBASIC8.82□□□□□ -1
LRCH3Q96II8 AL589666.2-201ENST00000624603 618 ntBASIC8.82□□□□□ -1
LRCH3Q96II8 ZBTB14-207ENST00000614697 3341 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
LRCH3Q96II8 CRTAM-201ENST00000227348 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LRCH3Q96II8 XRCC6P3-201ENST00000422187 1621 ntBASIC8.82□□□□□ -1
LRCH3Q96II8 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC8.82□□□□□ -1
LRCH3Q96II8 ADIPOQ-AS1-201ENST00000422718 3443 ntTSL 5 BASIC8.82□□□□□ -1
LRCH3Q96II8 ASPH-230ENST00000541428 2550 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
LRCH3Q96II8 CNIH4-205ENST00000465271 4125 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
LRCH3Q96II8 EEF1A1P9-201ENST00000514975 1383 ntBASIC8.82□□□□□ -1
LRCH3Q96II8 GLULP5-201ENST00000547831 1390 ntBASIC8.82□□□□□ -1
LRCH3Q96II8 CD22-201ENST00000085219 3268 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
LRCH3Q96II8 TCF4-224ENST00000564403 2696 ntAPPRIS ALT1 TSL 5 BASIC8.82□□□□□ -1
LRCH3Q96II8 EXOC7P1-201ENST00000509881 2059 ntBASIC8.82□□□□□ -1
LRCH3Q96II8 XCR1-201ENST00000309285 5281 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LRCH3Q96II8 SVEP1-203ENST00000401783 12350 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
LRCH3Q96II8 AC005722.2-201ENST00000577087 3370 ntBASIC8.82□□□□□ -1
LRCH3Q96II8 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LRCH3Q96II8 CDH13-202ENST00000428848 2195 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
LRCH3Q96II8 ATMIN-206ENST00000566488 5343 ntTSL 1 (best) BASIC8.82□□□□□ -1
LRCH3Q96II8 CDHR3-211ENST00000478080 2633 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
LRCH3Q96II8 PTK2B-201ENST00000346049 4147 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LRCH3Q96II8 CTC1-201ENST00000315684 7021 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
LRCH3Q96II8 AL390195.2-201ENST00000564771 2023 ntBASIC8.81□□□□□ -1
LRCH3Q96II8 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
LRCH3Q96II8 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
LRCH3Q96II8 MELK-208ENST00000536987 2125 ntTSL 2 BASIC8.81□□□□□ -1
LRCH3Q96II8 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
LRCH3Q96II8 AL353795.1-201ENST00000439134 1775 ntBASIC8.81□□□□□ -1
LRCH3Q96II8 KARSP1-201ENST00000451871 1752 ntBASIC8.81□□□□□ -1
LRCH3Q96II8 MAPK10-228ENST00000512689 2583 ntTSL 5 BASIC8.81□□□□□ -1
LRCH3Q96II8 AC125232.1-201ENST00000452554 1408 ntBASIC8.81□□□□□ -1
LRCH3Q96II8 AC026124.1-201ENST00000545709 3457 ntTSL 5 BASIC8.81□□□□□ -1
LRCH3Q96II8 ZNF92-202ENST00000357512 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
LRCH3Q96II8 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC8.81□□□□□ -1
LRCH3Q96II8 YAP1-203ENST00000524575 1638 ntTSL 2 BASIC8.81□□□□□ -1
LRCH3Q96II8 CDH11-202ENST00000394156 6874 ntTSL 1 (best) BASIC8.81□□□□□ -1
LRCH3Q96II8 TAAR8-201ENST00000275200 1029 ntAPPRIS P1 BASIC8.81□□□□□ -1
LRCH3Q96II8 OR1J2-201ENST00000335302 942 ntAPPRIS P1 BASIC8.81□□□□□ -1
LRCH3Q96II8 RNU6-501P-201ENST00000364072 100 ntBASIC8.81□□□□□ -1
LRCH3Q96II8 Y_RNA.401-201ENST00000383965 117 ntBASIC8.81□□□□□ -1
LRCH3Q96II8 RNU6-767P-201ENST00000384132 107 ntBASIC8.81□□□□□ -1
LRCH3Q96II8 HCG21-204ENST00000419481 605 ntTSL 3 BASIC8.81□□□□□ -1
LRCH3Q96II8 FBP2P1-202ENST00000424473 530 ntBASIC8.81□□□□□ -1
LRCH3Q96II8 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC8.81□□□□□ -1
LRCH3Q96II8 CCNB1IP1P1-201ENST00000428976 839 ntBASIC8.81□□□□□ -1
LRCH3Q96II8 AC092802.3-201ENST00000434207 420 ntTSL 3 BASIC8.81□□□□□ -1
LRCH3Q96II8 AL022324.2-201ENST00000434827 780 ntBASIC8.81□□□□□ -1
LRCH3Q96II8 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC8.81□□□□□ -1
LRCH3Q96II8 YWHAQP9-201ENST00000445891 512 ntBASIC8.81□□□□□ -1
LRCH3Q96II8 SNRPGP6-201ENST00000451124 220 ntBASIC8.81□□□□□ -1
LRCH3Q96II8 TFP1-201ENST00000460564 572 ntTSL 4 BASIC8.81□□□□□ -1
LRCH3Q96II8 AC022730.2-201ENST00000465359 452 ntBASIC8.81□□□□□ -1
LRCH3Q96II8 CBX5P1-201ENST00000468470 561 ntBASIC8.81□□□□□ -1
LRCH3Q96II8 RN7SL549P-201ENST00000478997 282 ntBASIC8.81□□□□□ -1
LRCH3Q96II8 AC044810.1-201ENST00000480271 711 ntBASIC8.81□□□□□ -1
LRCH3Q96II8 TFP1-203ENST00000490470 561 ntTSL 4 BASIC8.81□□□□□ -1
LRCH3Q96II8 RPL39P36-201ENST00000490784 156 ntBASIC8.81□□□□□ -1
LRCH3Q96II8 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC8.81□□□□□ -1
LRCH3Q96II8 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC8.81□□□□□ -1
LRCH3Q96II8 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC8.81□□□□□ -1
LRCH3Q96II8 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC8.81□□□□□ -1
LRCH3Q96II8 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC8.81□□□□□ -1
LRCH3Q96II8 RGS4-207ENST00000527809 817 ntTSL 4 BASIC8.81□□□□□ -1
LRCH3Q96II8 OR4A1P-201ENST00000532342 920 ntBASIC8.81□□□□□ -1
LRCH3Q96II8 AC008055.1-201ENST00000547032 609 ntBASIC8.81□□□□□ -1
LRCH3Q96II8 THAP2-202ENST00000547843 672 ntTSL 2 BASIC8.81□□□□□ -1
LRCH3Q96II8 AL359212.1-201ENST00000556608 614 ntBASIC8.81□□□□□ -1
LRCH3Q96II8 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC8.81□□□□□ -1
LRCH3Q96II8 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC8.81□□□□□ -1
LRCH3Q96II8 VN1R80P-201ENST00000597126 338 ntBASIC8.81□□□□□ -1
LRCH3Q96II8 AC073534.1-201ENST00000598671 1056 ntBASIC8.81□□□□□ -1
LRCH3Q96II8 NRBF2P5-201ENST00000603087 788 ntBASIC8.81□□□□□ -1
LRCH3Q96II8 7SK.7-201ENST00000603504 247 ntBASIC8.81□□□□□ -1
LRCH3Q96II8 AL008726.1-201ENST00000607703 569 ntTSL 4 BASIC8.81□□□□□ -1
LRCH3Q96II8 AL592494.3-201ENST00000609485 464 ntBASIC8.81□□□□□ -1
LRCH3Q96II8 pRNA.9-201ENST00000618609 89 ntBASIC8.81□□□□□ -1
LRCH3Q96II8 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC8.81□□□□□ -1
LRCH3Q96II8 AC243725.1-201ENST00000637164 436 ntBASIC8.81□□□□□ -1
LRCH3Q96II8 BRDT-205ENST00000399546 3357 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
LRCH3Q96II8 SIDT2-219ENST00000620360 3924 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LRCH3Q96II8 ZNF611-206ENST00000595798 2395 ntTSL 1 (best) BASIC8.81□□□□□ -1
LRCH3Q96II8 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
LRCH3Q96II8 ITIH3-202ENST00000449956 3007 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LRCH3Q96II8 PRKAR1A-211ENST00000586397 1940 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LRCH3Q96II8 ZNF430-203ENST00000595401 3021 ntTSL 2 BASIC8.81□□□□□ -1
LRCH3Q96II8 AC124319.2-201ENST00000575034 3651 ntTSL 2 BASIC8.81□□□□□ -1
LRCH3Q96II8 ALPK1-203ENST00000458497 5410 ntAPPRIS P3 TSL 5 BASIC8.81□□□□□ -1
LRCH3Q96II8 CAST-244ENST00000515663 1473 ntTSL 2 BASIC8.81□□□□□ -1
LRCH3Q96II8 PIGN-201ENST00000357637 4723 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
LRCH3Q96II8 AC091046.3-201ENST00000631455 1574 ntBASIC8.81□□□□□ -1
LRCH3Q96II8 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC8.81□□□□□ -1
LRCH3Q96II8 USP17L21-202ENST00000621388 1677 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms