Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC9.94□□□□□ -0.82
TOPBP1Q92547 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC9.94□□□□□ -0.82
TOPBP1Q92547 RPL7P61-201ENST00000451721 751 ntBASIC9.94□□□□□ -0.82
TOPBP1Q92547 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC9.94□□□□□ -0.82
TOPBP1Q92547 AC079841.1-201ENST00000481228 950 ntBASIC9.94□□□□□ -0.82
TOPBP1Q92547 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC9.94□□□□□ -0.82
TOPBP1Q92547 AC004825.1-201ENST00000555068 586 ntBASIC9.94□□□□□ -0.82
TOPBP1Q92547 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC9.94□□□□□ -0.82
TOPBP1Q92547 AC015720.2-201ENST00000567709 334 ntBASIC9.94□□□□□ -0.82
TOPBP1Q92547 PPATP2-201ENST00000605635 508 ntBASIC9.94□□□□□ -0.82
TOPBP1Q92547 AC024255.1-201ENST00000614376 102 ntBASIC9.94□□□□□ -0.82
TOPBP1Q92547 AC022726.2-201ENST00000634673 547 ntBASIC9.94□□□□□ -0.82
TOPBP1Q92547 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC9.94□□□□□ -0.82
TOPBP1Q92547 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
TOPBP1Q92547 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC9.94□□□□□ -0.82
TOPBP1Q92547 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
TOPBP1Q92547 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC9.94□□□□□ -0.82
TOPBP1Q92547 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
TOPBP1Q92547 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
TOPBP1Q92547 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
TOPBP1Q92547 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
TOPBP1Q92547 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
TOPBP1Q92547 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
TOPBP1Q92547 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC9.93□□□□□ -0.82
TOPBP1Q92547 AC087516.1-201ENST00000561236 2428 ntBASIC9.93□□□□□ -0.82
TOPBP1Q92547 EPPK1-202ENST00000615648 16002 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
TOPBP1Q92547 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
TOPBP1Q92547 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
TOPBP1Q92547 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
TOPBP1Q92547 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
TOPBP1Q92547 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
TOPBP1Q92547 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
TOPBP1Q92547 OR52B5P-201ENST00000435337 951 ntBASIC9.93□□□□□ -0.82
TOPBP1Q92547 CBX1P2-201ENST00000453841 458 ntBASIC9.93□□□□□ -0.82
TOPBP1Q92547 RPL32P33-201ENST00000487023 394 ntBASIC9.93□□□□□ -0.82
TOPBP1Q92547 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC9.93□□□□□ -0.82
TOPBP1Q92547 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC9.93□□□□□ -0.82
TOPBP1Q92547 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
TOPBP1Q92547 AC145423.1-201ENST00000605712 336 ntBASIC9.93□□□□□ -0.82
TOPBP1Q92547 OR52B5P-202ENST00000641118 1110 ntBASIC9.93□□□□□ -0.82
TOPBP1Q92547 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
TOPBP1Q92547 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
TOPBP1Q92547 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
TOPBP1Q92547 ERG-205ENST00000398910 4954 ntTSL 5 BASIC9.93□□□□□ -0.82
TOPBP1Q92547 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
TOPBP1Q92547 AC016583.1-201ENST00000624221 2431 ntBASIC9.93□□□□□ -0.82
TOPBP1Q92547 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
TOPBP1Q92547 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC9.93□□□□□ -0.82
TOPBP1Q92547 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
TOPBP1Q92547 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
TOPBP1Q92547 CD86-204ENST00000469710 1604 ntTSL 2 BASIC9.93□□□□□ -0.82
TOPBP1Q92547 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
TOPBP1Q92547 RNA5SP350-201ENST00000363298 111 ntBASIC9.92□□□□□ -0.82
TOPBP1Q92547 PTCD2P2-201ENST00000415579 1095 ntBASIC9.92□□□□□ -0.82
TOPBP1Q92547 AL450023.1-201ENST00000450868 751 ntBASIC9.92□□□□□ -0.82
TOPBP1Q92547 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC9.92□□□□□ -0.82
TOPBP1Q92547 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC9.92□□□□□ -0.82
TOPBP1Q92547 AL121612.2-201ENST00000612261 482 ntBASIC9.92□□□□□ -0.82
TOPBP1Q92547 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC9.92□□□□□ -0.82
TOPBP1Q92547 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
TOPBP1Q92547 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
TOPBP1Q92547 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
TOPBP1Q92547 FO393409.1-201ENST00000399325 1372 ntBASIC9.92□□□□□ -0.82
TOPBP1Q92547 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC9.92□□□□□ -0.82
TOPBP1Q92547 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
TOPBP1Q92547 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
TOPBP1Q92547 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
TOPBP1Q92547 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
TOPBP1Q92547 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
TOPBP1Q92547 CREM-208ENST00000361599 2170 ntTSL 5 BASIC9.92□□□□□ -0.82
TOPBP1Q92547 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
TOPBP1Q92547 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
TOPBP1Q92547 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
TOPBP1Q92547 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
TOPBP1Q92547 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
TOPBP1Q92547 CTNNA1P1-201ENST00000515849 2728 ntBASIC9.92□□□□□ -0.82
TOPBP1Q92547 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
TOPBP1Q92547 TPT1-204ENST00000379060 764 ntTSL 5 BASIC9.92□□□□□ -0.82
TOPBP1Q92547 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC9.92□□□□□ -0.82
TOPBP1Q92547 PGAM1P13-201ENST00000507497 754 ntBASIC9.92□□□□□ -0.82
TOPBP1Q92547 MIR4436B2-201ENST00000581415 91 ntBASIC9.92□□□□□ -0.82
TOPBP1Q92547 MIR4436B1-201ENST00000583272 91 ntBASIC9.92□□□□□ -0.82
TOPBP1Q92547 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
TOPBP1Q92547 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC9.92□□□□□ -0.82
TOPBP1Q92547 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TOPBP1Q92547 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC9.91□□□□□ -0.82
TOPBP1Q92547 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
TOPBP1Q92547 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
TOPBP1Q92547 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TOPBP1Q92547 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
TOPBP1Q92547 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
TOPBP1Q92547 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC9.91□□□□□ -0.82
TOPBP1Q92547 AL159987.1-201ENST00000347911 293 ntBASIC9.91□□□□□ -0.82
TOPBP1Q92547 RN7SKP213-201ENST00000410746 298 ntBASIC9.91□□□□□ -0.82
TOPBP1Q92547 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC9.91□□□□□ -0.82
TOPBP1Q92547 AL133173.1-201ENST00000423458 397 ntBASIC9.91□□□□□ -0.82
TOPBP1Q92547 RPS21P4-201ENST00000487122 248 ntBASIC9.91□□□□□ -0.82
TOPBP1Q92547 RPL15P21-201ENST00000495592 567 ntBASIC9.91□□□□□ -0.82
TOPBP1Q92547 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC9.91□□□□□ -0.82
TOPBP1Q92547 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC9.91□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms