Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC10.17□□□□□ -0.78
CFTRP13569 AL450996.1-201ENST00000445574 1202 ntBASIC10.17□□□□□ -0.78
CFTRP13569 AL450023.1-201ENST00000450868 751 ntBASIC10.17□□□□□ -0.78
CFTRP13569 AC026254.2-201ENST00000475295 371 ntBASIC10.17□□□□□ -0.78
CFTRP13569 BX284632.1-201ENST00000478218 541 ntBASIC10.17□□□□□ -0.78
CFTRP13569 AC079841.1-201ENST00000481228 950 ntBASIC10.17□□□□□ -0.78
CFTRP13569 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC10.17□□□□□ -0.78
CFTRP13569 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC10.17□□□□□ -0.78
CFTRP13569 AC008937.3-201ENST00000606813 1700 ntBASIC10.17□□□□□ -0.78
CFTRP13569 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CFTRP13569 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC10.16□□□□□ -0.78
CFTRP13569 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC10.16□□□□□ -0.78
CFTRP13569 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CFTRP13569 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
CFTRP13569 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC10.16□□□□□ -0.78
CFTRP13569 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC10.16□□□□□ -0.78
CFTRP13569 AC096921.2-201ENST00000561507 1916 ntBASIC10.16□□□□□ -0.78
CFTRP13569 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC10.16□□□□□ -0.78
CFTRP13569 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC10.16□□□□□ -0.78
CFTRP13569 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CFTRP13569 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CFTRP13569 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CFTRP13569 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
CFTRP13569 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CFTRP13569 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CFTRP13569 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
CFTRP13569 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CFTRP13569 CD86-204ENST00000469710 1604 ntTSL 2 BASIC10.16□□□□□ -0.78
CFTRP13569 AL139805.2-201ENST00000455305 2433 ntBASIC10.16□□□□□ -0.78
CFTRP13569 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CFTRP13569 CAV1-204ENST00000393470 598 ntTSL 4 BASIC10.16□□□□□ -0.78
CFTRP13569 OR2W4P-201ENST00000406496 926 ntBASIC10.16□□□□□ -0.78
CFTRP13569 AL357752.1-201ENST00000412817 349 ntBASIC10.16□□□□□ -0.78
CFTRP13569 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC10.16□□□□□ -0.78
CFTRP13569 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CFTRP13569 AC005033.1-201ENST00000428904 813 ntBASIC10.16□□□□□ -0.78
CFTRP13569 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC10.16□□□□□ -0.78
CFTRP13569 RPL7AP6-201ENST00000477943 801 ntBASIC10.16□□□□□ -0.78
CFTRP13569 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CFTRP13569 LDHC-203ENST00000535809 757 ntTSL 5 BASIC10.16□□□□□ -0.78
CFTRP13569 LDHC-205ENST00000537486 583 ntTSL 5 BASIC10.16□□□□□ -0.78
CFTRP13569 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
CFTRP13569 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
CFTRP13569 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC10.16□□□□□ -0.78
CFTRP13569 PPATP2-201ENST00000605635 508 ntBASIC10.16□□□□□ -0.78
CFTRP13569 AL021368.3-201ENST00000607119 578 ntBASIC10.16□□□□□ -0.78
CFTRP13569 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC10.16□□□□□ -0.78
CFTRP13569 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CFTRP13569 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
CFTRP13569 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC10.15□□□□□ -0.78
CFTRP13569 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
CFTRP13569 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
CFTRP13569 AL731556.1-201ENST00000394628 3711 ntBASIC10.15□□□□□ -0.78
CFTRP13569 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CFTRP13569 ALB-209ENST00000503124 1741 ntTSL 5 BASIC10.15□□□□□ -0.78
CFTRP13569 CTNNA1P1-201ENST00000515849 2728 ntBASIC10.15□□□□□ -0.78
CFTRP13569 AC013488.1-201ENST00000526618 1838 ntBASIC10.15□□□□□ -0.78
CFTRP13569 AFP-201ENST00000226359 1914 ntTSL 5 BASIC10.15□□□□□ -0.78
CFTRP13569 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC10.15□□□□□ -0.78
CFTRP13569 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CFTRP13569 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC10.15□□□□□ -0.78
CFTRP13569 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC10.15□□□□□ -0.78
CFTRP13569 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC10.15□□□□□ -0.78
CFTRP13569 AL136981.1-203ENST00000451452 3844 ntBASIC10.15□□□□□ -0.78
CFTRP13569 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC10.15□□□□□ -0.78
CFTRP13569 AL049539.1-201ENST00000611964 459 ntBASIC10.15□□□□□ -0.78
CFTRP13569 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC10.15□□□□□ -0.79
CFTRP13569 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC10.15□□□□□ -0.79
CFTRP13569 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC10.14□□□□□ -0.79
CFTRP13569 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CFTRP13569 MROH3P-201ENST00000435735 2676 ntBASIC10.14□□□□□ -0.79
CFTRP13569 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
CFTRP13569 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CFTRP13569 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
CFTRP13569 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
CFTRP13569 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
CFTRP13569 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC10.14□□□□□ -0.79
CFTRP13569 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
CFTRP13569 AL159987.1-201ENST00000347911 293 ntBASIC10.14□□□□□ -0.79
CFTRP13569 TPT1-204ENST00000379060 764 ntTSL 5 BASIC10.14□□□□□ -0.79
CFTRP13569 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC10.14□□□□□ -0.79
CFTRP13569 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC10.14□□□□□ -0.79
CFTRP13569 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC10.14□□□□□ -0.79
CFTRP13569 OR52B5P-201ENST00000435337 951 ntBASIC10.14□□□□□ -0.79
CFTRP13569 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CFTRP13569 FAR2P1-206ENST00000449736 709 ntBASIC10.14□□□□□ -0.79
CFTRP13569 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC10.14□□□□□ -0.79
CFTRP13569 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC10.14□□□□□ -0.79
CFTRP13569 AL591848.4-201ENST00000567832 3472 ntBASIC10.14□□□□□ -0.79
CFTRP13569 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC10.14□□□□□ -0.79
CFTRP13569 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC10.14□□□□□ -0.79
CFTRP13569 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
CFTRP13569 OR52B5P-202ENST00000641118 1110 ntBASIC10.14□□□□□ -0.79
CFTRP13569 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CFTRP13569 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC10.14□□□□□ -0.79
CFTRP13569 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CFTRP13569 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CFTRP13569 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
CFTRP13569 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CFTRP13569 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms