Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AC138956.2-201ENST00000512934 528 ntTSL 5 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 RCC2P4-201ENST00000513160 1042 ntBASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 LINC02428-203ENST00000513793 438 ntTSL 5 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 Y_RNA.659-201ENST00000515994 113 ntBASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 RNU6-977P-201ENST00000516411 103 ntBASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 RNU6-1057P-201ENST00000517162 102 ntBASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AC060775.1-201ENST00000518241 520 ntBASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AC022784.6-203ENST00000520255 863 ntTSL 3 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 RPL30-213ENST00000523172 274 ntTSL 5 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 NANOG-202ENST00000526286 870 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AC110058.1-201ENST00000530389 563 ntTSL 4 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AP001972.4-201ENST00000530550 560 ntTSL 4 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AP001775.1-201ENST00000532608 586 ntBASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AC109810.1-201ENST00000534066 224 ntBASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AC073578.1-201ENST00000535133 493 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 LINC02414-201ENST00000537280 494 ntTSL 4 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 RAD52-212ENST00000541619 560 ntTSL 4 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 STIP1-211ENST00000543847 772 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AP000439.1-201ENST00000544004 581 ntTSL 4 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 NKAPP1-203ENST00000554109 573 ntTSL 4 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 CCDC32-204ENST00000558750 814 ntTSL 5 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AC132938.1-201ENST00000566971 360 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AC136944.3-202ENST00000567422 509 ntBASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 ZNF213-AS1-202ENST00000571449 919 ntTSL 3 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 APOC1P1-202ENST00000571466 253 ntBASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 RPAIN-214ENST00000574003 561 ntTSL 4 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 APOC1P1-204ENST00000575148 560 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 KRT16P1-202ENST00000577750 679 ntTSL 3 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 CIAPIN1P-201ENST00000584883 931 ntBASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AC004134.1-201ENST00000587835 225 ntBASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 NF1P5-201ENST00000588287 448 ntBASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AC008474.1-201ENST00000589127 573 ntTSL 4 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AC011498.1-201ENST00000591414 478 ntTSL 2 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AL161798.1-201ENST00000604630 131 ntBASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AP000553.1-201ENST00000610143 430 ntBASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AL772337.4-201ENST00000610707 745 ntBASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 DLG2-AS1_2.1-201ENST00000614607 218 ntBASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 MIR4726-201ENST00000615971 58 ntBASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AC245505.3-201ENST00000616788 358 ntBASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AL591926.6-201ENST00000617375 415 ntBASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AL391669.1-201ENST00000619829 285 ntBASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AL627230.3-201ENST00000622239 192 ntBASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 FP236240.2-201ENST00000623896 1052 ntTSL 2 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AC109826.1-203ENST00000624259 1105 ntTSL 5 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 CLUHP10-201ENST00000631979 980 ntBASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 BMS1P21-201ENST00000634565 365 ntBASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 TPRXL-213ENST00000636198 651 ntBASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 TUBA1C-210ENST00000639419 1075 ntTSL 5 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 ERGIC3-220ENST00000640748 832 ntTSL 5 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 SP4-201ENST00000222584 6126 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 ZNF415-202ENST00000421033 2402 ntAPPRIS P3 TSL 4 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 CTAGE16P-201ENST00000435601 2412 ntBASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 ANKRD13C-201ENST00000262346 3327 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 LINC01561-201ENST00000369071 2176 ntBASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 SDE2-201ENST00000272091 3975 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 EIF4G2-201ENST00000339995 3978 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 OR6C66P-203ENST00000641469 4627 ntBASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 LINC01446-201ENST00000380970 3484 ntTSL 2 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 RAD51C-201ENST00000337432 2591 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 CLEC4M-208ENST00000596363 1669 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 CYP17A1-207ENST00000639393 1684 ntAPPRIS ALT1 TSL 5 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 SYNPO2L-201ENST00000372873 4121 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 TM2D1-202ENST00000371177 3218 ntTSL 5 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 CECR2-201ENST00000262608 4783 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 MFSD8-259ENST00000642042 2303 ntBASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 TACC2-212ENST00000453444 9158 ntTSL 5 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 ATP8B1-201ENST00000283684 5818 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 GAD1-202ENST00000358196 3604 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 HSD3B1-204ENST00000528909 1436 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 ZBED4-201ENST00000216268 6893 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 IRF5-201ENST00000249375 2749 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 EXOSC10-201ENST00000304457 2721 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 WDPCP-201ENST00000272321 3392 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 SULF1-223ENST00000616868 3381 ntTSL 5 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 COL4A6-210ENST00000621266 6627 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 MTR-202ENST00000366577 10529 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 PPARD-201ENST00000311565 3774 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 ANKZF1-203ENST00000410034 2486 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 DNAI2-202ENST00000446837 2474 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 AC104051.2-201ENST00000518934 2461 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 NUPR1-201ENST00000324873 5491 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP4-4Q9BYR3 RABGAP1L-207ENST00000367690 1815 ntTSL 2 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 153.6 ms