Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC002480.4-201ENST00000414116 2592 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
USB1Q9BQ65 CPNE8-201ENST00000331366 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
USB1Q9BQ65 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 PCBP2-222ENST00000552296 1342 ntAPPRIS ALT1 TSL 5 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
USB1Q9BQ65 AC011369.1-201ENST00000517408 2181 ntTSL 3 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 TMEM43-201ENST00000306077 3341 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
USB1Q9BQ65 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
USB1Q9BQ65 NLRP3-201ENST00000336119 4170 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
USB1Q9BQ65 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 RLIMP2-201ENST00000427891 1563 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 SSX2-202ENST00000337502 1292 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
USB1Q9BQ65 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 CST9LP1-201ENST00000376987 444 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 RNU6-474P-201ENST00000384243 107 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 RNU6-196P-201ENST00000384315 107 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 NINJ2-202ENST00000397265 793 ntAPPRIS ALT2 TSL 3 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 AL034403.1-201ENST00000399414 885 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 AL138807.1-201ENST00000400354 459 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 RPL36A-HNRNPH2-201ENST00000409170 562 ntAPPRIS P1 TSL 4 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 RN7SKP29-201ENST00000410957 272 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 RNU6-373P-201ENST00000411247 98 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 AL450992.3-201ENST00000413192 568 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 SPA17P1-201ENST00000416656 452 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 TMBIM7P-201ENST00000418074 855 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 AL953862.1-201ENST00000423016 168 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 CFL1P7-201ENST00000424759 486 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 NPM1P34-201ENST00000428821 893 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 RPL7P56-201ENST00000429441 717 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 AC023274.2-201ENST00000445264 521 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 AL450023.2-201ENST00000453276 545 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 RPL18AP17-201ENST00000455326 198 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 BX248409.1-201ENST00000455497 255 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 AC099563.1-201ENST00000456086 418 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 AL391825.1-202ENST00000458136 741 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 AC073594.1-201ENST00000462065 364 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 RN7SL420P-201ENST00000463843 298 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 AC008481.2-201ENST00000483614 531 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 GAPDHP47-201ENST00000489113 999 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 PDCD10-218ENST00000497056 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
USB1Q9BQ65 IGKV1-27-201ENST00000498435 382 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 RNU6-1170P-201ENST00000515974 106 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 RNU2-46P-201ENST00000517038 113 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 PHBP17-201ENST00000528576 541 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 AP000790.1-201ENST00000528891 737 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 SLC2A13P1-201ENST00000531560 322 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 BANF2-205ENST00000545418 360 ntTSL 3 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 AC068305.2-201ENST00000550567 1205 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 AL157955.2-202ENST00000553921 467 ntTSL 3 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 SHBG-209ENST00000572182 479 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
USB1Q9BQ65 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 RN7SL474P-201ENST00000583485 301 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 CR769775.3-201ENST00000610388 219 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 AL590491.1-202ENST00000618038 394 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 CU639417.5-201ENST00000623983 476 ntTSL 3 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 LINC01002-228ENST00000633402 565 ntTSL 5 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 AC100810.6-201ENST00000638068 285 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 FAM238C-205ENST00000640641 391 ntBASIC7.86□□□□□ -1.15
USB1Q9BQ65 VSIG4-201ENST00000374737 1834 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
USB1Q9BQ65 ABCA11P-201ENST00000451020 1815 ntTSL 2 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 SKAP1-201ENST00000336915 1534 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
USB1Q9BQ65 RBM46-202ENST00000510397 3626 ntTSL 2 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 SYNPR-212ENST00000479198 2436 ntTSL 5 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 SLC28A2-201ENST00000347644 4374 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
USB1Q9BQ65 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC7.85□□□□□ -1.15
USB1Q9BQ65 EPN2-204ENST00000395620 3860 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
USB1Q9BQ65 AC090771.1-201ENST00000585803 1618 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC7.85□□□□□ -1.15
USB1Q9BQ65 USP17L8-201ENST00000527080 1593 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
USB1Q9BQ65 AC007923.2-201ENST00000584218 1591 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 AC127459.1-201ENST00000563129 2768 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC7.85□□□□□ -1.15
USB1Q9BQ65 AC093297.3-201ENST00000607056 2517 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 TRIM5-201ENST00000380027 2290 ntTSL 5 BASIC7.85□□□□□ -1.15
USB1Q9BQ65 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
USB1Q9BQ65 PRDM9-201ENST00000296682 3691 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
USB1Q9BQ65 RSPO2-203ENST00000517939 2487 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
USB1Q9BQ65 ZNF252P-208ENST00000592792 2485 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 SFR1-202ENST00000369729 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
USB1Q9BQ65 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC7.85□□□□□ -1.15
USB1Q9BQ65 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
USB1Q9BQ65 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms