Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
LHX1P48742 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
LHX1P48742 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.57□□□□□ -1.36
LHX1P48742 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
LHX1P48742 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
LHX1P48742 OR7E156P-201ENST00000400303 464 ntBASIC6.57□□□□□ -1.36
LHX1P48742 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.57□□□□□ -1.36
LHX1P48742 AC023141.3-201ENST00000436698 278 ntBASIC6.57□□□□□ -1.36
LHX1P48742 AC110602.1-201ENST00000437414 318 ntBASIC6.57□□□□□ -1.36
LHX1P48742 AL353662.1-201ENST00000439099 327 ntBASIC6.57□□□□□ -1.36
LHX1P48742 TRIM60P16-201ENST00000444048 694 ntBASIC6.57□□□□□ -1.36
LHX1P48742 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.57□□□□□ -1.36
LHX1P48742 AL022237.1-201ENST00000446663 358 ntBASIC6.57□□□□□ -1.36
LHX1P48742 PPIAP27-201ENST00000453800 265 ntBASIC6.57□□□□□ -1.36
LHX1P48742 AC023194.2-201ENST00000465398 406 ntBASIC6.57□□□□□ -1.36
LHX1P48742 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.57□□□□□ -1.36
LHX1P48742 IGKV3D-25-201ENST00000519599 235 ntBASIC6.57□□□□□ -1.36
LHX1P48742 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC6.57□□□□□ -1.36
LHX1P48742 AC090115.2-201ENST00000548060 883 ntBASIC6.57□□□□□ -1.36
LHX1P48742 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.57□□□□□ -1.36
LHX1P48742 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.57□□□□□ -1.36
LHX1P48742 MIR4301-201ENST00000577203 66 ntBASIC6.57□□□□□ -1.36
LHX1P48742 PRELID3BP3-201ENST00000584963 545 ntBASIC6.57□□□□□ -1.36
LHX1P48742 AC008507.3-201ENST00000585753 472 ntBASIC6.57□□□□□ -1.36
LHX1P48742 AL683813.2-201ENST00000605245 502 ntBASIC6.57□□□□□ -1.36
LHX1P48742 AL161912.3-201ENST00000605404 628 ntBASIC6.57□□□□□ -1.36
LHX1P48742 AL513218.1-201ENST00000606527 391 ntBASIC6.57□□□□□ -1.36
LHX1P48742 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.57□□□□□ -1.36
LHX1P48742 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.57□□□□□ -1.36
LHX1P48742 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.57□□□□□ -1.36
LHX1P48742 OR7A1P-202ENST00000641542 1158 ntBASIC6.57□□□□□ -1.36
LHX1P48742 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
LHX1P48742 AL669831.5-218ENST00000591702 1873 ntBASIC6.57□□□□□ -1.36
LHX1P48742 AC009779.8-201ENST00000641684 4384 ntBASIC6.57□□□□□ -1.36
LHX1P48742 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
LHX1P48742 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
LHX1P48742 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
LHX1P48742 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
LHX1P48742 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
LHX1P48742 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.57□□□□□ -1.36
LHX1P48742 AC092692.1-201ENST00000623625 2595 ntBASIC6.57□□□□□ -1.36
LHX1P48742 AC022325.1-201ENST00000502748 2199 ntBASIC6.57□□□□□ -1.36
LHX1P48742 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
LHX1P48742 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
LHX1P48742 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LHX1P48742 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LHX1P48742 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.56□□□□□ -1.36
LHX1P48742 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LHX1P48742 LYARP1-201ENST00000436977 1501 ntBASIC6.56□□□□□ -1.36
LHX1P48742 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.56□□□□□ -1.36
LHX1P48742 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.56□□□□□ -1.36
LHX1P48742 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
LHX1P48742 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LHX1P48742 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.56□□□□□ -1.36
LHX1P48742 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
LHX1P48742 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
LHX1P48742 SNORD8-201ENST00000363915 110 ntBASIC6.56□□□□□ -1.36
LHX1P48742 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.56□□□□□ -1.36
LHX1P48742 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.56□□□□□ -1.36
LHX1P48742 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LHX1P48742 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.56□□□□□ -1.36
LHX1P48742 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.56□□□□□ -1.36
LHX1P48742 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.56□□□□□ -1.36
LHX1P48742 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LHX1P48742 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.56□□□□□ -1.36
LHX1P48742 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.56□□□□□ -1.36
LHX1P48742 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.56□□□□□ -1.36
LHX1P48742 AC098847.1-201ENST00000473094 348 ntBASIC6.56□□□□□ -1.36
LHX1P48742 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LHX1P48742 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.56□□□□□ -1.36
LHX1P48742 OR6M2P-201ENST00000529831 871 ntBASIC6.56□□□□□ -1.36
LHX1P48742 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LHX1P48742 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.56□□□□□ -1.36
LHX1P48742 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.56□□□□□ -1.36
LHX1P48742 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC6.56□□□□□ -1.36
LHX1P48742 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.56□□□□□ -1.36
LHX1P48742 AC073333.2-201ENST00000603589 769 ntBASIC6.56□□□□□ -1.36
LHX1P48742 AC137695.1-201ENST00000604126 489 ntBASIC6.56□□□□□ -1.36
LHX1P48742 AC004801.6-201ENST00000616571 978 ntBASIC6.56□□□□□ -1.36
LHX1P48742 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.56□□□□□ -1.36
LHX1P48742 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.56□□□□□ -1.36
LHX1P48742 AC116667.2-201ENST00000641075 823 ntBASIC6.56□□□□□ -1.36
LHX1P48742 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
LHX1P48742 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LHX1P48742 AC009831.5-201ENST00000624000 3189 ntBASIC6.56□□□□□ -1.36
LHX1P48742 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.56□□□□□ -1.36
LHX1P48742 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LHX1P48742 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
LHX1P48742 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.56□□□□□ -1.36
LHX1P48742 AL354854.1-201ENST00000455940 1363 ntBASIC6.56□□□□□ -1.36
LHX1P48742 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LHX1P48742 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.55□□□□□ -1.36
LHX1P48742 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
LHX1P48742 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
LHX1P48742 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.55□□□□□ -1.36
LHX1P48742 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
LHX1P48742 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
LHX1P48742 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
LHX1P48742 RN7SKP275-201ENST00000364626 301 ntBASIC6.55□□□□□ -1.36
LHX1P48742 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms