Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 LYZ-202ENST00000548839 558 ntTSL 2 BASIC7.25□□□□□ -1.25
NID1P14543 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC7.25□□□□□ -1.25
NID1P14543 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC7.25□□□□□ -1.25
NID1P14543 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC7.25□□□□□ -1.25
NID1P14543 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC7.25□□□□□ -1.25
NID1P14543 AC015871.2-201ENST00000603605 948 ntBASIC7.25□□□□□ -1.25
NID1P14543 AP004372.1-201ENST00000604842 844 ntBASIC7.25□□□□□ -1.25
NID1P14543 AL049634.3-201ENST00000604968 457 ntBASIC7.25□□□□□ -1.25
NID1P14543 AC012557.1-201ENST00000607115 611 ntBASIC7.25□□□□□ -1.25
NID1P14543 AL353726.1-201ENST00000614041 1000 ntBASIC7.25□□□□□ -1.25
NID1P14543 pRNA.12-201ENST00000614353 90 ntBASIC7.25□□□□□ -1.25
NID1P14543 pRNA.3-201ENST00000615048 90 ntBASIC7.25□□□□□ -1.25
NID1P14543 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC7.25□□□□□ -1.25
NID1P14543 AC005355.2-201ENST00000625064 484 ntBASIC7.25□□□□□ -1.25
NID1P14543 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NID1P14543 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NID1P14543 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NID1P14543 AURKA-201ENST00000312783 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NID1P14543 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC7.25□□□□□ -1.25
NID1P14543 AC025040.2-201ENST00000558657 1852 ntBASIC7.25□□□□□ -1.25
NID1P14543 TCF4-246ENST00000570287 3163 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NID1P14543 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NID1P14543 AC104078.1-201ENST00000499292 1448 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NID1P14543 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC7.25□□□□□ -1.25
NID1P14543 GUCY2GP-201ENST00000479705 3222 ntBASIC7.25□□□□□ -1.25
NID1P14543 OR2V2-203ENST00000641791 4428 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
NID1P14543 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC7.25□□□□□ -1.25
NID1P14543 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NID1P14543 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC7.25□□□□□ -1.25
NID1P14543 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NID1P14543 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC7.25□□□□□ -1.25
NID1P14543 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NID1P14543 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
NID1P14543 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NID1P14543 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NID1P14543 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NID1P14543 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
NID1P14543 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
NID1P14543 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC7.24□□□□□ -1.25
NID1P14543 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
NID1P14543 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC7.24□□□□□ -1.25
NID1P14543 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NID1P14543 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NID1P14543 AC087392.3-202ENST00000358446 1754 ntBASIC7.24□□□□□ -1.25
NID1P14543 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NID1P14543 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NID1P14543 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NID1P14543 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NID1P14543 Y_RNA.9-201ENST00000362354 101 ntBASIC7.24□□□□□ -1.25
NID1P14543 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC7.24□□□□□ -1.25
NID1P14543 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC7.24□□□□□ -1.25
NID1P14543 RNU5A-6P-201ENST00000384136 116 ntBASIC7.24□□□□□ -1.25
NID1P14543 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
NID1P14543 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC7.24□□□□□ -1.25
NID1P14543 MIR1302-11-201ENST00000408051 138 ntBASIC7.24□□□□□ -1.25
NID1P14543 MIR1302-9-201ENST00000408365 138 ntBASIC7.24□□□□□ -1.25
NID1P14543 MIR1302-10-201ENST00000408734 138 ntBASIC7.24□□□□□ -1.25
NID1P14543 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC7.24□□□□□ -1.25
NID1P14543 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC7.24□□□□□ -1.25
NID1P14543 ZEB2-AS1-201ENST00000421083 453 ntTSL 2 BASIC7.24□□□□□ -1.25
NID1P14543 BRWD1-AS1-201ENST00000423274 691 ntTSL 4 BASIC7.24□□□□□ -1.25
NID1P14543 ZBTB8OSP2-201ENST00000423890 504 ntBASIC7.24□□□□□ -1.25
NID1P14543 NPM1P22-201ENST00000427761 952 ntBASIC7.24□□□□□ -1.25
NID1P14543 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC7.24□□□□□ -1.25
NID1P14543 AC073614.1-201ENST00000438690 650 ntBASIC7.24□□□□□ -1.25
NID1P14543 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC7.24□□□□□ -1.25
NID1P14543 AL139135.2-201ENST00000445040 433 ntBASIC7.24□□□□□ -1.25
NID1P14543 DPPA3P1-201ENST00000448050 469 ntBASIC7.24□□□□□ -1.25
NID1P14543 AL135929.1-201ENST00000449287 552 ntBASIC7.24□□□□□ -1.25
NID1P14543 AC098828.2-201ENST00000452342 573 ntTSL 2 BASIC7.24□□□□□ -1.25
NID1P14543 AL354872.1-201ENST00000456361 967 ntBASIC7.24□□□□□ -1.25
NID1P14543 AC146507.1-201ENST00000468335 354 ntBASIC7.24□□□□□ -1.25
NID1P14543 ZBTB20-AS4-201ENST00000472323 675 ntTSL 3 BASIC7.24□□□□□ -1.25
NID1P14543 AL358832.1-201ENST00000497800 389 ntBASIC7.24□□□□□ -1.25
NID1P14543 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NID1P14543 AC006499.5-201ENST00000505037 514 ntBASIC7.24□□□□□ -1.25
NID1P14543 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
NID1P14543 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC7.24□□□□□ -1.25
NID1P14543 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC7.24□□□□□ -1.25
NID1P14543 TBCA-203ENST00000517679 545 ntTSL 3 BASIC7.24□□□□□ -1.25
NID1P14543 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC7.24□□□□□ -1.25
NID1P14543 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC7.24□□□□□ -1.25
NID1P14543 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC7.24□□□□□ -1.25
NID1P14543 ZNF345-205ENST00000526123 458 ntTSL 3 BASIC7.24□□□□□ -1.25
NID1P14543 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.24□□□□□ -1.25
NID1P14543 OR4N1P-201ENST00000554847 949 ntBASIC7.24□□□□□ -1.25
NID1P14543 LINC02289-202ENST00000556781 861 ntTSL 3 BASIC7.24□□□□□ -1.25
NID1P14543 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC7.24□□□□□ -1.25
NID1P14543 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC7.24□□□□□ -1.25
NID1P14543 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC7.24□□□□□ -1.25
NID1P14543 LINC00674-202ENST00000590734 160 ntBASIC7.24□□□□□ -1.25
NID1P14543 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC7.24□□□□□ -1.25
NID1P14543 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC7.24□□□□□ -1.25
NID1P14543 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.24□□□□□ -1.25
NID1P14543 AC027243.2-201ENST00000602530 724 ntBASIC7.24□□□□□ -1.25
NID1P14543 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC7.24□□□□□ -1.25
NID1P14543 MIR1302-2-201ENST00000607096 138 ntBASIC7.24□□□□□ -1.25
NID1P14543 RN7SL3-201ENST00000610674 299 ntBASIC7.24□□□□□ -1.25
NID1P14543 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC7.24□□□□□ -1.25
NID1P14543 AL133351.5-201ENST00000612789 106 ntBASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms