Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC8.6□□□□□ -1.03
HOXA2O43364 SERPINB6-202ENST00000380520 3265 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
HOXA2O43364 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
HOXA2O43364 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
HOXA2O43364 ZNF887P-201ENST00000431363 1407 ntBASIC8.6□□□□□ -1.03
HOXA2O43364 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
HOXA2O43364 CYP4A22-202ENST00000371890 1780 ntTSL 5 BASIC8.6□□□□□ -1.03
HOXA2O43364 NFIA-208ENST00000407417 2123 ntTSL 2 BASIC8.6□□□□□ -1.03
HOXA2O43364 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
HOXA2O43364 MCM3-205ENST00000596288 3169 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
HOXA2O43364 AC124319.2-201ENST00000575034 3651 ntTSL 2 BASIC8.6□□□□□ -1.03
HOXA2O43364 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
HOXA2O43364 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC8.6□□□□□ -1.03
HOXA2O43364 LINC01258-201ENST00000512517 2059 ntTSL 2 BASIC8.6□□□□□ -1.03
HOXA2O43364 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
HOXA2O43364 AF127936.2-201ENST00000455253 1724 ntTSL 5 BASIC8.6□□□□□ -1.03
HOXA2O43364 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC8.6□□□□□ -1.03
HOXA2O43364 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
HOXA2O43364 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC8.59□□□□□ -1.03
HOXA2O43364 GAD1-217ENST00000625689 3700 ntTSL 5 BASIC8.59□□□□□ -1.03
HOXA2O43364 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
HOXA2O43364 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
HOXA2O43364 GJA10-201ENST00000369352 1652 ntAPPRIS P2 BASIC8.59□□□□□ -1.03
HOXA2O43364 CLDN2-203ENST00000541806 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
HOXA2O43364 RAB5B-210ENST00000553116 3322 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
HOXA2O43364 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC8.59□□□□□ -1.03
HOXA2O43364 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
HOXA2O43364 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC8.59□□□□□ -1.03
HOXA2O43364 CEP44-204ENST00000457424 3290 ntTSL 2 BASIC8.59□□□□□ -1.03
HOXA2O43364 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
HOXA2O43364 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC8.59□□□□□ -1.03
HOXA2O43364 STAG3-219ENST00000620100 4203 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
HOXA2O43364 CU633906.2-201ENST00000624576 2257 ntTSL 5 BASIC8.59□□□□□ -1.03
HOXA2O43364 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC8.59□□□□□ -1.03
HOXA2O43364 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC8.59□□□□□ -1.03
HOXA2O43364 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
HOXA2O43364 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
HOXA2O43364 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC8.59□□□□□ -1.03
HOXA2O43364 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
HOXA2O43364 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
HOXA2O43364 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
HOXA2O43364 Y_RNA.402-201ENST00000383972 102 ntBASIC8.59□□□□□ -1.03
HOXA2O43364 Y_RNA.548-201ENST00000384656 105 ntBASIC8.59□□□□□ -1.03
HOXA2O43364 AL590004.1-201ENST00000405321 300 ntBASIC8.59□□□□□ -1.03
HOXA2O43364 AL109918.1-202ENST00000406724 436 ntBASIC8.59□□□□□ -1.03
HOXA2O43364 RPS7-204ENST00000407445 833 ntTSL 2 BASIC8.59□□□□□ -1.03
HOXA2O43364 MIR1302-11-201ENST00000408051 138 ntBASIC8.59□□□□□ -1.03
HOXA2O43364 MIR1302-9-201ENST00000408365 138 ntBASIC8.59□□□□□ -1.03
HOXA2O43364 MIR1302-10-201ENST00000408734 138 ntBASIC8.59□□□□□ -1.03
HOXA2O43364 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC8.59□□□□□ -1.03
HOXA2O43364 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC8.59□□□□□ -1.03
HOXA2O43364 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC8.59□□□□□ -1.03
HOXA2O43364 AC093107.1-201ENST00000422772 609 ntBASIC8.59□□□□□ -1.03
HOXA2O43364 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
HOXA2O43364 AC069154.1-201ENST00000432914 542 ntBASIC8.59□□□□□ -1.03
HOXA2O43364 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC8.59□□□□□ -1.03
HOXA2O43364 FO393419.1-201ENST00000443746 355 ntBASIC8.59□□□□□ -1.03
HOXA2O43364 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC8.59□□□□□ -1.03
HOXA2O43364 PDSS1P2-201ENST00000449397 678 ntBASIC8.59□□□□□ -1.03
HOXA2O43364 RPS4XP12-201ENST00000461747 709 ntBASIC8.59□□□□□ -1.03
HOXA2O43364 EIF4E2P2-201ENST00000492033 736 ntBASIC8.59□□□□□ -1.03
HOXA2O43364 PTGES3P3-201ENST00000511479 482 ntBASIC8.59□□□□□ -1.03
HOXA2O43364 AC068134.3-201ENST00000513620 788 ntBASIC8.59□□□□□ -1.03
HOXA2O43364 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC8.59□□□□□ -1.03
HOXA2O43364 AP000445.1-201ENST00000526692 741 ntBASIC8.59□□□□□ -1.03
HOXA2O43364 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC8.59□□□□□ -1.03
HOXA2O43364 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC8.59□□□□□ -1.03
HOXA2O43364 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
HOXA2O43364 AC126335.1-201ENST00000568414 510 ntTSL 2 BASIC8.59□□□□□ -1.03
HOXA2O43364 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC8.59□□□□□ -1.03
HOXA2O43364 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC8.59□□□□□ -1.03
HOXA2O43364 MIR1302-2-201ENST00000607096 138 ntBASIC8.59□□□□□ -1.03
HOXA2O43364 MIR8075-201ENST00000614354 80 ntBASIC8.59□□□□□ -1.03
HOXA2O43364 AP003789.1-201ENST00000617737 605 ntBASIC8.59□□□□□ -1.03
HOXA2O43364 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC8.59□□□□□ -1.03
HOXA2O43364 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC8.59□□□□□ -1.03
HOXA2O43364 OR52B5P-202ENST00000641118 1110 ntBASIC8.59□□□□□ -1.03
HOXA2O43364 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
HOXA2O43364 GIMAP2-201ENST00000223293 1449 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
HOXA2O43364 GSTM2-204ENST00000369831 1730 ntTSL 2 BASIC8.59□□□□□ -1.03
HOXA2O43364 ERBB3-203ENST00000415288 4353 ntTSL 2 BASIC8.59□□□□□ -1.03
HOXA2O43364 Z97200.1-201ENST00000606154 2045 ntBASIC8.59□□□□□ -1.03
HOXA2O43364 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
HOXA2O43364 R3HCC1L-203ENST00000370584 3372 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
HOXA2O43364 CDY4P-201ENST00000418290 1513 ntBASIC8.59□□□□□ -1.03
HOXA2O43364 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC8.59□□□□□ -1.03
HOXA2O43364 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
HOXA2O43364 HMSD-201ENST00000408945 2101 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
HOXA2O43364 ABCA11P-202ENST00000504019 2110 ntBASIC8.59□□□□□ -1.03
HOXA2O43364 CORIN-205ENST00000504584 2417 ntTSL 2 BASIC8.59□□□□□ -1.03
HOXA2O43364 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC8.59□□□□□ -1.04
HOXA2O43364 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
HOXA2O43364 TMEM144-201ENST00000296529 3442 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HOXA2O43364 PIWIL3-202ENST00000527701 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
HOXA2O43364 AC105760.1-201ENST00000244820 2231 ntTSL 2 BASIC8.58□□□□□ -1.04
HOXA2O43364 AP004289.1-201ENST00000436307 2205 ntBASIC8.58□□□□□ -1.04
HOXA2O43364 CAPN3-206ENST00000397163 3228 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HOXA2O43364 AMMECR1L-201ENST00000272647 4658 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HOXA2O43364 BUB1B-202ENST00000412359 3628 ntTSL 2 BASIC8.58□□□□□ -1.04
HOXA2O43364 TBX5-AS1-201ENST00000528549 3620 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms