Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 AC022164.1-201ENST00000568767 2673 ntBASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 AC027575.3-201ENST00000583058 2747 ntBASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
CLHC1Q8NHS4 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
CLHC1Q8NHS4 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
CLHC1Q8NHS4 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.96□□□□□ -1.45
CLHC1Q8NHS4 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
CLHC1Q8NHS4 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
CLHC1Q8NHS4 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 RNA5SP85-201ENST00000365378 119 ntBASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 UBTFL2-201ENST00000411859 1191 ntBASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 GTF3AP6-201ENST00000432585 986 ntBASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 AL645939.3-201ENST00000435408 225 ntBASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 NPM1P23-201ENST00000440193 849 ntBASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 AC016908.1-201ENST00000442571 1219 ntBASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 REG1CP-206ENST00000447469 496 ntBASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 RPL31P11-202ENST00000454082 372 ntBASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 RARRES2P3-201ENST00000457739 473 ntBASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 RN7SL369P-201ENST00000477138 299 ntBASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 RN7SL267P-201ENST00000485107 261 ntBASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 MTCO1P55-201ENST00000489829 745 ntBASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 AC015524.1-201ENST00000491585 472 ntBASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 GM2AP2-201ENST00000491764 562 ntBASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 SUMO2P4-201ENST00000504193 276 ntBASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 AC131935.1-201ENST00000524621 333 ntBASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 AC090651.1-201ENST00000567865 634 ntBASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 MIR4732-201ENST00000581873 76 ntBASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 NPIPB1P-202ENST00000588786 828 ntBASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 AC107993.1-201ENST00000591343 684 ntBASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 AC027334.1-201ENST00000603257 310 ntBASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 AL591222.2-201ENST00000604443 754 ntBASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 AC068726.1-201ENST00000610993 341 ntBASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 MIR6070-201ENST00000613967 103 ntBASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 OR7A1P-202ENST00000641542 1158 ntBASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 OR7E91P-202ENST00000642062 1198 ntBASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLHC1Q8NHS4 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 RPL34P27-201ENST00000428810 349 ntBASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 AC234771.4-201ENST00000441416 730 ntBASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 AC010343.2-201ENST00000510162 224 ntBASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 AC026782.2-201ENST00000510845 636 ntBASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms