RNA–Protein interactions for RNA: ENST00000377833.8

CUBN-202, Transcript of cubilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUBN, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-202ENST00000377833 NISCHQ9Y2I1 1504 aa10.36□□□□□ -0.75
CUBN-202ENST00000377833 PELP1Q8IZL8 1130 aaKnown RBP9.8□□□□□ -0.84
CUBN-202ENST00000377833 FAM9AQ8IZU1 332 aaPredicted RBP9.6□□□□□ -0.87
CUBN-202ENST00000377833 DCAF8L2P0C7V8 631 aa9.55□□□□□ -0.88
CUBN-202ENST00000377833 APLP2Q06481 763 aa9.38□□□□□ -0.91
CUBN-202ENST00000377833 CCDC180Q9P1Z9 1646 aa9.33□□□□□ -0.92
CUBN-202ENST00000377833 ZEB1P37275 1124 aaPredicted RBP9.28□□□□□ -0.92
CUBN-202ENST00000377833 MYT1Q01538 1121 aa9.27□□□□□ -0.93
CUBN-202ENST00000377833 CCER1Q8TC90 406 aaPredicted RBP9.24□□□□□ -0.93
CUBN-202ENST00000377833 SUPT5HO00267 1087 aaKnown RBP9.15□□□□□ -0.94
CUBN-202ENST00000377833 CENPBP07199 599 aaPredicted RBP9.09□□□□□ -0.95
CUBN-202ENST00000377833 SHROOM4Q9ULL8 1493 aa8.97□□□□□ -0.97
CUBN-202ENST00000377833 YTHDC1Q96MU7 727 aaKnown RBP8.97□□□□□ -0.97
CUBN-202ENST00000377833 NEFLP07196 543 aa8.88□□□□□ -0.99
CUBN-202ENST00000377833 TRIM41Q8WV44 630 aa8.86□□□□□ -0.99
CUBN-202ENST00000377833 ERICH6Q7L0X2 663 aa8.8□□□□□ -1
CUBN-202ENST00000377833 ACIN1Q9UKV3 1341 aaKnown RBP8.77□□□□□ -1.01
CUBN-202ENST00000377833 CLSPNQ9HAW4 1339 aa8.73□□□□□ -1.01
CUBN-202ENST00000377833 RB1CC1Q8TDY2 1594 aa8.71□□□□□ -1.02
CUBN-202ENST00000377833 UBTFP17480 764 aaKnown RBP8.68□□□□□ -1.02
CUBN-202ENST00000377833 ZCCHC6Q5VYS8 1495 aaKnown RBP8.68□□□□□ -1.02
CUBN-202ENST00000377833 NACADO15069 1562 aa8.68□□□□□ -1.02
CUBN-202ENST00000377833 DAXXQ9UER7 740 aaPredicted RBP8.66□□□□□ -1.02
CUBN-202ENST00000377833 TRIM26Q12899 539 aaPredicted RBP8.65□□□□□ -1.03
CUBN-202ENST00000377833 DCAF1Q9Y4B6 1507 aa8.64□□□□□ -1.03
CUBN-202ENST00000377833 PCGF6Q9BYE7 350 aa8.58□□□□□ -1.04
CUBN-202ENST00000377833 EEA1Q15075 1411 aa8.55□□□□□ -1.04
CUBN-202ENST00000377833 MYO15BQ96JP2 1530 aa8.54□□□□□ -1.04
CUBN-202ENST00000377833 NEFMP07197 916 aa8.53□□□□□ -1.04
CUBN-202ENST00000377833 SCRIBQ14160 1630 aa8.48□□□□□ -1.05
CUBN-202ENST00000377833 MYT1LQ9UL68 1186 aa8.46□□□□□ -1.05
CUBN-202ENST00000377833 TTBK1Q5TCY1 1321 aaPredicted RBP8.45□□□□□ -1.06
CUBN-202ENST00000377833 BAZ1AQ9NRL2 1556 aaPredicted RBP8.43□□□□□ -1.06
CUBN-202ENST00000377833 CDK11AQ9UQ88 783 aaPredicted RBP8.43□□□□□ -1.06
CUBN-202ENST00000377833 RTL5Q5HYW3 569 aaPredicted RBP8.43□□□□□ -1.06
CUBN-202ENST00000377833 ZNF316A6NFI3 1004 aaPredicted RBP8.4□□□□□ -1.06
CUBN-202ENST00000377833 ATP1B4Q9UN42 357 aaPredicted RBP8.4□□□□□ -1.06
CUBN-202ENST00000377833 ABCC9O60706 1549 aa8.39□□□□□ -1.07
CUBN-202ENST00000377833 EIF5BO60841 1220 aaKnown RBP8.37□□□□□ -1.07
CUBN-202ENST00000377833 HRCP23327 699 aa8.36□□□□□ -1.07
CUBN-202ENST00000377833 SMARCA2P51531 1590 aa8.36□□□□□ -1.07
CUBN-202ENST00000377833 ZBTB47Q9UFB7 747 aaPredicted RBP8.33□□□□□ -1.08
CUBN-202ENST00000377833 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.32□□□□□ -1.08
CUBN-202ENST00000377833 HNRNPUL2Q1KMD3 747 aaKnown RBP8.32□□□□□ -1.08
CUBN-202ENST00000377833 EHMT2Q96KQ7 1210 aa8.3□□□□□ -1.08
CUBN-202ENST00000377833 CHIC1Q5VXU3 224 aa8.3□□□□□ -1.08
CUBN-202ENST00000377833 RSF1Q96T23 1441 aaPredicted RBP8.3□□□□□ -1.08
CUBN-202ENST00000377833 BAZ1BQ9UIG0 1483 aaKnown RBP8.27□□□□□ -1.08
CUBN-202ENST00000377833 GOLGA3Q08378 1498 aa8.26□□□□□ -1.09
CUBN-202ENST00000377833 SLC24A1O60721 1099 aa8.25□□□□□ -1.09
CUBN-202ENST00000377833 CEP164Q9UPV0 1460 aa8.25□□□□□ -1.09
CUBN-202ENST00000377833 ANP32CO43423 234 aa8.24□□□□□ -1.09
CUBN-202ENST00000377833 CEP162Q5TB80 1403 aa8.24□□□□□ -1.09
CUBN-202ENST00000377833 FHAD1B1AJZ9 1412 aa8.24□□□□□ -1.09
CUBN-202ENST00000377833 ANP32BQ92688 251 aaKnown RBP8.22□□□□□ -1.09
CUBN-202ENST00000377833 RANGAP1P46060 587 aaPredicted RBP8.22□□□□□ -1.09
CUBN-202ENST00000377833 ARID4BQ4LE39 1312 aaPredicted RBP8.21□□□□□ -1.1
CUBN-202ENST00000377833 DIEXFQ68CQ4 756 aaKnown RBP8.2□□□□□ -1.1
CUBN-202ENST00000377833 UPF2Q9HAU5 1272 aaKnown RBP8.2□□□□□ -1.1
CUBN-202ENST00000377833 TONSLQ96HA7 1378 aa8.19□□□□□ -1.1
CUBN-202ENST00000377833 KIF27Q86VH2 1401 aa8.18□□□□□ -1.1
CUBN-202ENST00000377833 CLIP1P30622 1438 aa8.18□□□□□ -1.1
CUBN-202ENST00000377833 ANP32AP39687 249 aaKnown RBP8.17□□□□□ -1.1
CUBN-202ENST00000377833 ANP32EQ9BTT0 268 aa8.17□□□□□ -1.1
CUBN-202ENST00000377833 CANXP27824 592 aaKnown RBP8.14□□□□□ -1.11
CUBN-202ENST00000377833 GLIPR1L2Q4G1C9 344 aa8.13□□□□□ -1.11
CUBN-202ENST00000377833 FAM50AQ14320 339 aaKnown RBP8.13□□□□□ -1.11
CUBN-202ENST00000377833 ESF1Q9H501 851 aaKnown RBP8.13□□□□□ -1.11
CUBN-202ENST00000377833 TOP2AP11388 1531 aaKnown RBP8.12□□□□□ -1.11
CUBN-202ENST00000377833 WRNQ14191 1432 aaPredicted RBP eCLIP8.12□□□□□ -1.11
CUBN-202ENST00000377833 CHMP4BQ9H444 224 aaKnown RBP8.11□□□□□ -1.11
CUBN-202ENST00000377833 CDCA8Q53HL2 280 aa8.11□□□□□ -1.11
CUBN-202ENST00000377833 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.11□□□□□ -1.11
CUBN-202ENST00000377833 CSRNP3Q8WYN3 585 aa8.11□□□□□ -1.11
CUBN-202ENST00000377833 ABCC8Q09428 1581 aa8.1□□□□□ -1.11
CUBN-202ENST00000377833 MTUS2Q5JR59 1369 aa8.1□□□□□ -1.11
CUBN-202ENST00000377833 TRIM52Q96A61 297 aa8.09□□□□□ -1.11
CUBN-202ENST00000377833 FMN1Q68DA7 1419 aa8.07□□□□□ -1.12
CUBN-202ENST00000377833 NEUROD1Q13562 356 aa8.06□□□□□ -1.12
CUBN-202ENST00000377833 SMARCA4P51532 1647 aa8.06□□□□□ -1.12
CUBN-202ENST00000377833 MYH16Q9H6N6 1097 aa8.05□□□□□ -1.12
CUBN-202ENST00000377833 NPM1P06748 294 aaKnown RBP eCLIP8.05□□□□□ -1.12
CUBN-202ENST00000377833 CFAP44Q96MT7 982 aa8.04□□□□□ -1.12
CUBN-202ENST00000377833 TIMELESSQ9UNS1 1208 aa8.04□□□□□ -1.12
CUBN-202ENST00000377833 ITGAEP38570 1179 aa8.04□□□□□ -1.12
CUBN-202ENST00000377833 SLC4A1APQ9BWU0 796 aaKnown RBP8.04□□□□□ -1.12
CUBN-202ENST00000377833 EIF3AQ14152 1382 aaKnown RBP8.03□□□□□ -1.12
CUBN-202ENST00000377833 HAP1P54257 671 aaPredicted RBP8.03□□□□□ -1.12
CUBN-202ENST00000377833 TNIKQ9UKE5 1360 aa8.02□□□□□ -1.12
CUBN-202ENST00000377833 POLR3GLQ9BT43 218 aa8.02□□□□□ -1.13
CUBN-202ENST00000377833 HSP90AA1P07900 732 aaKnown RBP8.01□□□□□ -1.13
CUBN-202ENST00000377833 CUX1P39880 1505 aa8.01□□□□□ -1.13
CUBN-202ENST00000377833 ERCC6Q03468 1493 aa8.01□□□□□ -1.13
CUBN-202ENST00000377833 CHMP4AQ9BY43 222 aa8.01□□□□□ -1.13
CUBN-202ENST00000377833 KANK1Q14678 1352 aa8□□□□□ -1.13
CUBN-202ENST00000377833 ARHGAP35Q9NRY4 1499 aa8□□□□□ -1.13
CUBN-202ENST00000377833 CCDC18Q5T9S5 1454 aa7.99□□□□□ -1.13
CUBN-202ENST00000377833 PDS5BQ9NTI5 1447 aa7.99□□□□□ -1.13
CUBN-202ENST00000377833 MS4A1P11836 297 aa7.98□□□□□ -1.13
CUBN-202ENST00000377833 TSPY4P0CV99 314 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms