Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.32□□□□□ -1.4
RNF44Q7L0R7 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.32□□□□□ -1.4
RNF44Q7L0R7 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF44Q7L0R7 MTND1P6-201ENST00000523621 946 ntBASIC6.32□□□□□ -1.4
RNF44Q7L0R7 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.32□□□□□ -1.4
RNF44Q7L0R7 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC6.32□□□□□ -1.4
RNF44Q7L0R7 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC6.32□□□□□ -1.4
RNF44Q7L0R7 AL049840.5-201ENST00000602827 552 ntBASIC6.32□□□□□ -1.4
RNF44Q7L0R7 MTATP6P2-201ENST00000603319 678 ntBASIC6.32□□□□□ -1.4
RNF44Q7L0R7 AL356986.1-201ENST00000604085 341 ntBASIC6.32□□□□□ -1.4
RNF44Q7L0R7 AC114477.1-201ENST00000605097 605 ntBASIC6.32□□□□□ -1.4
RNF44Q7L0R7 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.32□□□□□ -1.4
RNF44Q7L0R7 AC245389.2-201ENST00000616023 576 ntBASIC6.32□□□□□ -1.4
RNF44Q7L0R7 AC242843.1-201ENST00000618702 573 ntBASIC6.32□□□□□ -1.4
RNF44Q7L0R7 AC015722.2-201ENST00000622210 551 ntBASIC6.32□□□□□ -1.4
RNF44Q7L0R7 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.32□□□□□ -1.4
RNF44Q7L0R7 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
RNF44Q7L0R7 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.32□□□□□ -1.4
RNF44Q7L0R7 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF44Q7L0R7 AL136531.3-201ENST00000624378 3658 ntBASIC6.32□□□□□ -1.4
RNF44Q7L0R7 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.32□□□□□ -1.4
RNF44Q7L0R7 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF44Q7L0R7 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RNF44Q7L0R7 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 AC092725.2-201ENST00000567658 1389 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 HSPA8P19-201ENST00000505359 1517 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 AC105114.1-201ENST00000624795 1862 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 AC007012.2-201ENST00000623206 1676 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 RNU1-24P-201ENST00000364285 165 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 RNA5SP85-201ENST00000365378 119 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 RNU6-925P-201ENST00000384629 104 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 VIM2P-201ENST00000402383 1294 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 RPS18P1-201ENST00000447840 458 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 BZW1P1-201ENST00000454901 1240 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 FCF1P6-201ENST00000456841 595 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 HMGB1P3-201ENST00000502802 616 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 AC083906.1-201ENST00000509298 406 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 SUMO2P7-201ENST00000511179 285 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 AC138517.1-201ENST00000515724 568 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 NOP56P3-201ENST00000549457 385 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 AL162632.2-201ENST00000553933 399 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 AC006116.7-201ENST00000590141 756 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 AC068726.1-201ENST00000610993 341 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 GAPDHP41-201ENST00000613707 975 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 AC005393.1-201ENST00000617916 584 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 MIR6813-201ENST00000621638 56 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 AP000943.4-201ENST00000622912 357 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 AC019080.5-201ENST00000624891 757 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 AC073488.9-201ENST00000631601 754 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 AL022323.4-201ENST00000623980 13120 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 AC122713.2-201ENST00000624942 3335 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.31□□□□□ -1.4
RNF44Q7L0R7 CCAT2-201ENST00000630920 1752 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 AL596244.1-201ENST00000567068 3779 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 SAMM50P1-201ENST00000455403 1399 ntBASIC6.31□□□□□ -1.4
RNF44Q7L0R7 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RNF44Q7L0R7 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RNF44Q7L0R7 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RNF44Q7L0R7 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 361.6 ms