Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AL021707.7-201ENST00000607991 416 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 AL135786.2-201ENST00000608422 615 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC7.57□□□□□ -1.2
SOX4Q06945 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC7.57□□□□□ -1.2
SOX4Q06945 AL365181.4-201ENST00000609800 547 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 VN1R74P-201ENST00000613259 503 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 AC099842.1-201ENST00000619919 596 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 AL138693.1-201ENST00000622219 129 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 AC007490.1-201ENST00000624321 703 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 AC010608.2-201ENST00000624830 470 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC7.57□□□□□ -1.2
SOX4Q06945 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.57□□□□□ -1.2
SOX4Q06945 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SOX4Q06945 AC005702.3-201ENST00000585345 1447 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SOX4Q06945 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SOX4Q06945 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SOX4Q06945 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC7.57□□□□□ -1.2
SOX4Q06945 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SOX4Q06945 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SOX4Q06945 AC013268.3-201ENST00000262716 2324 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC7.57□□□□□ -1.2
SOX4Q06945 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
SOX4Q06945 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.57□□□□□ -1.2
SOX4Q06945 AC017002.4-201ENST00000604721 1525 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SOX4Q06945 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
SOX4Q06945 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SOX4Q06945 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC7.56□□□□□ -1.2
SOX4Q06945 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
SOX4Q06945 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC7.56□□□□□ -1.2
SOX4Q06945 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SOX4Q06945 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
SOX4Q06945 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
SOX4Q06945 USP3-201ENST00000268049 5311 ntTSL 5 BASIC7.56□□□□□ -1.2
SOX4Q06945 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
SOX4Q06945 RNU4-4P-201ENST00000364588 130 ntBASIC7.56□□□□□ -1.2
SOX4Q06945 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SOX4Q06945 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC7.56□□□□□ -1.2
SOX4Q06945 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC7.56□□□□□ -1.2
SOX4Q06945 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC7.56□□□□□ -1.2
SOX4Q06945 RPL17P17-201ENST00000419491 557 ntBASIC7.56□□□□□ -1.2
SOX4Q06945 AC021876.1-201ENST00000425959 359 ntBASIC7.56□□□□□ -1.2
SOX4Q06945 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC7.56□□□□□ -1.2
SOX4Q06945 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.56□□□□□ -1.2
SOX4Q06945 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC7.56□□□□□ -1.2
SOX4Q06945 LSM3P3-201ENST00000436601 306 ntBASIC7.56□□□□□ -1.2
SOX4Q06945 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC7.56□□□□□ -1.2
SOX4Q06945 AC092393.1-201ENST00000439625 742 ntBASIC7.56□□□□□ -1.2
SOX4Q06945 PPIAP32-201ENST00000449940 472 ntBASIC7.56□□□□□ -1.2
SOX4Q06945 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC7.56□□□□□ -1.2
SOX4Q06945 RN7SL372P-201ENST00000461982 298 ntBASIC7.56□□□□□ -1.2
SOX4Q06945 PPP1R2P6-201ENST00000478565 588 ntBASIC7.56□□□□□ -1.2
SOX4Q06945 RPL21P47-201ENST00000483696 477 ntBASIC7.56□□□□□ -1.2
SOX4Q06945 AC008410.1-201ENST00000483777 339 ntBASIC7.56□□□□□ -1.2
SOX4Q06945 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC7.56□□□□□ -1.2
SOX4Q06945 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC7.56□□□□□ -1.2
SOX4Q06945 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SOX4Q06945 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.56□□□□□ -1.2
SOX4Q06945 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC7.56□□□□□ -1.2
SOX4Q06945 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC7.56□□□□□ -1.2
SOX4Q06945 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC7.56□□□□□ -1.2
SOX4Q06945 AC089984.3-201ENST00000552838 363 ntBASIC7.56□□□□□ -1.2
SOX4Q06945 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC7.56□□□□□ -1.2
SOX4Q06945 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC7.56□□□□□ -1.2
SOX4Q06945 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC7.56□□□□□ -1.2
SOX4Q06945 AC234778.2-201ENST00000566241 354 ntBASIC7.56□□□□□ -1.2
SOX4Q06945 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC7.56□□□□□ -1.2
SOX4Q06945 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC7.56□□□□□ -1.2
SOX4Q06945 ARGFXP2-201ENST00000579304 949 ntBASIC7.56□□□□□ -1.2
SOX4Q06945 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC7.56□□□□□ -1.2
SOX4Q06945 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC7.56□□□□□ -1.2
SOX4Q06945 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC7.56□□□□□ -1.2
SOX4Q06945 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC7.56□□□□□ -1.2
SOX4Q06945 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SOX4Q06945 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.56□□□□□ -1.2
SOX4Q06945 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
SOX4Q06945 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SOX4Q06945 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SOX4Q06945 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SOX4Q06945 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SOX4Q06945 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SOX4Q06945 LRRC37A9P-201ENST00000603850 5376 ntBASIC7.56□□□□□ -1.2
SOX4Q06945 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.56□□□□□ -1.2
SOX4Q06945 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
SOX4Q06945 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC7.56□□□□□ -1.2
SOX4Q06945 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
SOX4Q06945 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
SOX4Q06945 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SOX4Q06945 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SOX4Q06945 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SOX4Q06945 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
SOX4Q06945 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
SOX4Q06945 AC008432.1-201ENST00000615912 1320 ntBASIC7.55□□□□□ -1.2
SOX4Q06945 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SOX4Q06945 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
SOX4Q06945 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC7.55□□□□□ -1.2
SOX4Q06945 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
SOX4Q06945 BX005019.1-201ENST00000561881 1810 ntBASIC7.55□□□□□ -1.2
SOX4Q06945 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms