Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.24□□□□□ -1.25
GABPAQ06546 RNU4ATAC-201ENST00000580972 127 ntBASIC7.24□□□□□ -1.25
GABPAQ06546 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.24□□□□□ -1.25
GABPAQ06546 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC7.24□□□□□ -1.25
GABPAQ06546 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC7.24□□□□□ -1.25
GABPAQ06546 AC100767.2-201ENST00000604840 693 ntBASIC7.24□□□□□ -1.25
GABPAQ06546 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.24□□□□□ -1.25
GABPAQ06546 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.24□□□□□ -1.25
GABPAQ06546 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.24□□□□□ -1.25
GABPAQ06546 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.24□□□□□ -1.25
GABPAQ06546 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.24□□□□□ -1.25
GABPAQ06546 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
GABPAQ06546 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.24□□□□□ -1.25
GABPAQ06546 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.24□□□□□ -1.25
GABPAQ06546 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
GABPAQ06546 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
GABPAQ06546 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
GABPAQ06546 AC006213.6-201ENST00000623722 4179 ntBASIC7.24□□□□□ -1.25
GABPAQ06546 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
GABPAQ06546 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
GABPAQ06546 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
GABPAQ06546 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
GABPAQ06546 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.23□□□□□ -1.25
GABPAQ06546 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC7.23□□□□□ -1.25
GABPAQ06546 AC024587.1-201ENST00000505925 2157 ntBASIC7.23□□□□□ -1.25
GABPAQ06546 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.23□□□□□ -1.25
GABPAQ06546 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.23□□□□□ -1.25
GABPAQ06546 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
GABPAQ06546 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
GABPAQ06546 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
GABPAQ06546 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
GABPAQ06546 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
GABPAQ06546 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
GABPAQ06546 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
GABPAQ06546 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
GABPAQ06546 RNU1-150P-201ENST00000362491 162 ntBASIC7.23□□□□□ -1.25
GABPAQ06546 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC7.23□□□□□ -1.25
GABPAQ06546 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC7.23□□□□□ -1.25
GABPAQ06546 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.23□□□□□ -1.25
GABPAQ06546 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC7.23□□□□□ -1.25
GABPAQ06546 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.23□□□□□ -1.25
GABPAQ06546 RNA5SP271-201ENST00000516700 88 ntBASIC7.23□□□□□ -1.25
GABPAQ06546 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.23□□□□□ -1.25
GABPAQ06546 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
GABPAQ06546 IGKV3D-34-201ENST00000522638 302 ntBASIC7.23□□□□□ -1.25
GABPAQ06546 AL645933.2-201ENST00000606743 1207 ntBASIC7.23□□□□□ -1.25
GABPAQ06546 AC096861.1-201ENST00000616652 240 ntBASIC7.23□□□□□ -1.25
GABPAQ06546 AC096708.4-201ENST00000620563 552 ntBASIC7.23□□□□□ -1.25
GABPAQ06546 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC7.23□□□□□ -1.25
GABPAQ06546 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC7.23□□□□□ -1.25
GABPAQ06546 AL139805.2-201ENST00000455305 2433 ntBASIC7.23□□□□□ -1.25
GABPAQ06546 AC092692.1-201ENST00000623625 2595 ntBASIC7.23□□□□□ -1.25
GABPAQ06546 AF287957.1-201ENST00000607368 1595 ntBASIC7.23□□□□□ -1.25
GABPAQ06546 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
GABPAQ06546 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
GABPAQ06546 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
GABPAQ06546 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.23□□□□□ -1.25
GABPAQ06546 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
GABPAQ06546 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.22□□□□□ -1.25
GABPAQ06546 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
GABPAQ06546 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.22□□□□□ -1.25
GABPAQ06546 AC091305.2-201ENST00000624049 1576 ntBASIC7.22□□□□□ -1.25
GABPAQ06546 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
GABPAQ06546 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
GABPAQ06546 CRP-204ENST00000368112 787 ntTSL 2 BASIC7.22□□□□□ -1.25
GABPAQ06546 RPS15AP30-201ENST00000420976 390 ntBASIC7.22□□□□□ -1.25
GABPAQ06546 RPS3P2-201ENST00000421346 701 ntBASIC7.22□□□□□ -1.25
GABPAQ06546 FABP5P2-201ENST00000439042 408 ntBASIC7.22□□□□□ -1.25
GABPAQ06546 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.22□□□□□ -1.25
GABPAQ06546 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC7.22□□□□□ -1.25
GABPAQ06546 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.22□□□□□ -1.25
GABPAQ06546 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.22□□□□□ -1.25
GABPAQ06546 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.22□□□□□ -1.25
GABPAQ06546 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC7.22□□□□□ -1.25
GABPAQ06546 AP003396.4-201ENST00000527574 265 ntBASIC7.22□□□□□ -1.25
GABPAQ06546 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC7.22□□□□□ -1.25
GABPAQ06546 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC7.22□□□□□ -1.25
GABPAQ06546 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC7.22□□□□□ -1.25
GABPAQ06546 OTX2-203ENST00000554559 715 ntTSL 5 BASIC7.22□□□□□ -1.25
GABPAQ06546 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.22□□□□□ -1.25
GABPAQ06546 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.22□□□□□ -1.25
GABPAQ06546 AC005244.1-201ENST00000582566 339 ntBASIC7.22□□□□□ -1.25
GABPAQ06546 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.22□□□□□ -1.25
GABPAQ06546 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
GABPAQ06546 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC7.22□□□□□ -1.25
GABPAQ06546 MIR6793-201ENST00000612376 63 ntBASIC7.22□□□□□ -1.25
GABPAQ06546 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
GABPAQ06546 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.22□□□□□ -1.25
GABPAQ06546 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.22□□□□□ -1.25
GABPAQ06546 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.22□□□□□ -1.25
GABPAQ06546 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
GABPAQ06546 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.22□□□□□ -1.25
GABPAQ06546 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
GABPAQ06546 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
GABPAQ06546 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.22□□□□□ -1.25
GABPAQ06546 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
GABPAQ06546 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
GABPAQ06546 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.21□□□□□ -1.25
GABPAQ06546 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
GABPAQ06546 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms