Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AL591379.1-207ENST00000635982 261 ntBASIC8.63□□□□□ -1.03
VPS9D1Q9Y2B5 AMYH02020865.1-205ENST00000636189 261 ntBASIC8.63□□□□□ -1.03
VPS9D1Q9Y2B5 OGDH-210ENST00000631326 4116 ntTSL 5 BASIC8.63□□□□□ -1.03
VPS9D1Q9Y2B5 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
VPS9D1Q9Y2B5 MYH2-204ENST00000532183 2528 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
VPS9D1Q9Y2B5 AC024337.1-201ENST00000558860 1562 ntTSL 4 BASIC8.63□□□□□ -1.03
VPS9D1Q9Y2B5 AC108467.2-201ENST00000617640 1597 ntBASIC8.63□□□□□ -1.03
VPS9D1Q9Y2B5 ACTR6-201ENST00000188312 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS9D1Q9Y2B5 SPATA31A6-201ENST00000332857 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS9D1Q9Y2B5 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
VPS9D1Q9Y2B5 LINC01258-201ENST00000512517 2059 ntTSL 2 BASIC8.63□□□□□ -1.03
VPS9D1Q9Y2B5 LETM2-207ENST00000523983 1776 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS9D1Q9Y2B5 DYNLRB1-201ENST00000300469 1464 ntTSL 5 BASIC8.63□□□□□ -1.03
VPS9D1Q9Y2B5 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS9D1Q9Y2B5 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS9D1Q9Y2B5 GBAP1-202ENST00000459805 2922 ntTSL 5 BASIC8.63□□□□□ -1.03
VPS9D1Q9Y2B5 ANKRD42-202ENST00000393389 4066 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
VPS9D1Q9Y2B5 R3HDM2-207ENST00000441731 4076 ntTSL 5 BASIC8.63□□□□□ -1.03
VPS9D1Q9Y2B5 CYP4A11-203ENST00000371905 1725 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
VPS9D1Q9Y2B5 MAGEC1-201ENST00000285879 4270 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS9D1Q9Y2B5 CYP1D1P-201ENST00000416662 1433 ntBASIC8.63□□□□□ -1.03
VPS9D1Q9Y2B5 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 IDI2-201ENST00000277517 1359 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 GIN1-201ENST00000399004 3229 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 LINC00558-201ENST00000569422 3163 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 TDP1-203ENST00000393454 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 SNORA7.3-201ENST00000384186 139 ntBASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 RNU6-74P-201ENST00000384235 107 ntBASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 RAB5CP1-201ENST00000395972 580 ntBASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 MTCO2P33-201ENST00000402100 465 ntBASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 PMCHL1-202ENST00000423102 261 ntBASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 CCDC144NL-AS1-202ENST00000423473 839 ntTSL 5 BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 RPL5P6-201ENST00000425640 886 ntBASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 RPL35P8-201ENST00000433284 337 ntBASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 AC009961.2-201ENST00000435771 251 ntBASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 PRSS37-203ENST00000438520 826 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 AL391825.1-202ENST00000458136 741 ntBASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 AC063943.1-201ENST00000465434 453 ntBASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 MRPS17P3-201ENST00000465453 385 ntBASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 AC108064.1-201ENST00000513791 460 ntBASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 ATOX1-205ENST00000522314 724 ntTSL 2 BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 AP000781.1-201ENST00000534162 311 ntTSL 3 BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 CCND2P1-201ENST00000539268 799 ntBASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 AC018448.2-201ENST00000548295 305 ntBASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 TUBA1C-204ENST00000549183 696 ntTSL 2 BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 OR7E159P-201ENST00000553761 298 ntBASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 AC055876.1-202ENST00000567053 138 ntBASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 RN7SL711P-201ENST00000579731 299 ntBASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 AC005726.4-201ENST00000582858 458 ntBASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 AC003098.1-201ENST00000591540 494 ntTSL 3 BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 AL356458.1-201ENST00000604764 465 ntBASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 Z98752.3-201ENST00000621802 566 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 AC022418.1-201ENST00000624118 445 ntBASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 Z69720.2-201ENST00000624755 279 ntBASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 AC138649.5-201ENST00000637456 137 ntBASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 CHI3L2-204ENST00000466741 1518 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 CKAP2P1-201ENST00000555477 2049 ntBASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 SUB1-201ENST00000265073 3507 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 RSPO2-203ENST00000517939 2487 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 FBXW11P1-201ENST00000393804 1474 ntBASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 AC103760.1-201ENST00000521326 1486 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 FLT1-206ENST00000615611 1476 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 SIDT2-219ENST00000620360 3924 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 CNIH4-205ENST00000465271 4125 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 AL031985.3-201ENST00000565390 2449 ntBASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 ASNSP1-204ENST00000641977 1664 ntBASIC8.62□□□□□ -1.03
VPS9D1Q9Y2B5 CLK1-201ENST00000321356 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms