Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 NEXMIF-201ENST00000055682 11719 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
MACF1Q9UPN3 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC2.42□□□□□ -2.02
MACF1Q9UPN3 CENPIP1-201ENST00000425713 902 ntBASIC2.42□□□□□ -2.02
MACF1Q9UPN3 HMGB3P24-201ENST00000433260 622 ntBASIC2.42□□□□□ -2.02
MACF1Q9UPN3 AC073143.1-201ENST00000436316 395 ntBASIC2.42□□□□□ -2.02
MACF1Q9UPN3 GAPDHP23-201ENST00000444823 993 ntBASIC2.42□□□□□ -2.02
MACF1Q9UPN3 AL513533.1-201ENST00000453728 415 ntBASIC2.42□□□□□ -2.02
MACF1Q9UPN3 AC006967.1-201ENST00000467608 589 ntBASIC2.42□□□□□ -2.02
MACF1Q9UPN3 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC2.42□□□□□ -2.02
MACF1Q9UPN3 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
MACF1Q9UPN3 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC2.42□□□□□ -2.02
MACF1Q9UPN3 AC091905.4-201ENST00000623432 202 ntBASIC2.42□□□□□ -2.02
MACF1Q9UPN3 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC2.42□□□□□ -2.02
MACF1Q9UPN3 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
MACF1Q9UPN3 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
MACF1Q9UPN3 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC2.42□□□□□ -2.02
MACF1Q9UPN3 MYH10-202ENST00000360416 7762 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
MACF1Q9UPN3 LCT-201ENST00000264162 6279 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
MACF1Q9UPN3 THBS1-201ENST00000260356 7775 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
MACF1Q9UPN3 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC2.42□□□□□ -2.02
MACF1Q9UPN3 SCN5A-206ENST00000425664 8450 ntTSL 5 BASIC2.42□□□□□ -2.02
MACF1Q9UPN3 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC2.42□□□□□ -2.02
MACF1Q9UPN3 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
MACF1Q9UPN3 SHPRH-206ENST00000438092 6994 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
MACF1Q9UPN3 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
MACF1Q9UPN3 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
MACF1Q9UPN3 SLF2-201ENST00000238961 7288 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
MACF1Q9UPN3 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC2.42□□□□□ -2.02
MACF1Q9UPN3 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC2.42□□□□□ -2.02
MACF1Q9UPN3 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC2.42□□□□□ -2.02
MACF1Q9UPN3 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
MACF1Q9UPN3 NENFP1-201ENST00000419476 466 ntBASIC2.42□□□□□ -2.02
MACF1Q9UPN3 HSFY1P1-201ENST00000423928 1178 ntBASIC2.42□□□□□ -2.02
MACF1Q9UPN3 AC016027.4-201ENST00000450866 277 ntBASIC2.42□□□□□ -2.02
MACF1Q9UPN3 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC2.42□□□□□ -2.02
MACF1Q9UPN3 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC2.42□□□□□ -2.02
MACF1Q9UPN3 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC2.42□□□□□ -2.02
MACF1Q9UPN3 OR2BH1P-201ENST00000608850 864 ntBASIC2.42□□□□□ -2.02
MACF1Q9UPN3 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 SNX29-205ENST00000566228 8171 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 NRP1-201ENST00000265371 5882 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 TEP1-209ENST00000556935 7643 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 NWD1-204ENST00000524140 7641 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 XIST-206ENST00000434839 2865 ntTSL 5 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 CEP63-202ENST00000337090 5632 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 BOLA3P4-201ENST00000418151 400 ntBASIC2.41□□□□□ -2.02
MACF1Q9UPN3 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 AC245047.1-201ENST00000433276 873 ntBASIC2.41□□□□□ -2.02
MACF1Q9UPN3 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 MEG3-220ENST00000522771 6984 ntTSL 5 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 MYO18B-205ENST00000536101 8051 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 MYLK-220ENST00000578202 1447 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 SETD7-207ENST00000608958 5281 ntTSL 5 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 AGPAT4-201ENST00000320285 7865 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 PPIP5K1-203ENST00000360135 5559 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 PPIP5K1-204ENST00000360301 5565 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 PTAFR-203ENST00000539896 4191 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 SSX3-202ENST00000376893 800 ntTSL 2 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 AL050335.1-201ENST00000396909 869 ntBASIC2.41□□□□□ -2.02
MACF1Q9UPN3 AL049697.3-201ENST00000406493 982 ntBASIC2.41□□□□□ -2.02
MACF1Q9UPN3 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 OR7E158P-201ENST00000524483 910 ntBASIC2.41□□□□□ -2.02
MACF1Q9UPN3 BMPR1APS2-201ENST00000527904 1012 ntBASIC2.41□□□□□ -2.02
MACF1Q9UPN3 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 FN1-207ENST00000421182 8103 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 AC087516.1-201ENST00000561236 2428 ntBASIC2.41□□□□□ -2.02
MACF1Q9UPN3 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
MACF1Q9UPN3 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms