Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 ABRAXAS1-201ENST00000321945 4291 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PHOX2BQ99453 PSG9-209ENST00000621109 2019 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
PHOX2BQ99453 DSG4-201ENST00000308128 3579 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PHOX2BQ99453 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC8.56□□□□□ -1.04
PHOX2BQ99453 LINC00672-201ENST00000583195 3692 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PHOX2BQ99453 ECD-203ENST00000430082 2246 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PHOX2BQ99453 CARF-201ENST00000320443 5209 ntTSL 2 BASIC8.56□□□□□ -1.04
PHOX2BQ99453 MELK-207ENST00000536860 2342 ntTSL 2 BASIC8.55□□□□□ -1.04
PHOX2BQ99453 CERS6-AS1-201ENST00000425636 2890 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
PHOX2BQ99453 NPIPA7-202ENST00000530217 1331 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
PHOX2BQ99453 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC8.55□□□□□ -1.04
PHOX2BQ99453 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
PHOX2BQ99453 AL031985.3-201ENST00000565390 2449 ntBASIC8.55□□□□□ -1.04
PHOX2BQ99453 MKNK1-AS1-201ENST00000602433 2445 ntTSL 2 BASIC8.55□□□□□ -1.04
PHOX2BQ99453 R3HDM2P1-201ENST00000505381 1960 ntBASIC8.55□□□□□ -1.04
PHOX2BQ99453 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
PHOX2BQ99453 AC110769.2-201ENST00000602760 1548 ntBASIC8.55□□□□□ -1.04
PHOX2BQ99453 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
PHOX2BQ99453 OTOA-201ENST00000286149 3471 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
PHOX2BQ99453 DHX9-201ENST00000367549 4240 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PHOX2BQ99453 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
PHOX2BQ99453 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
PHOX2BQ99453 AC239859.1-201ENST00000449715 2594 ntBASIC8.55□□□□□ -1.04
PHOX2BQ99453 AC128688.2-201ENST00000563632 1937 ntBASIC8.55□□□□□ -1.04
PHOX2BQ99453 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PHOX2BQ99453 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PHOX2BQ99453 C4BPB-202ENST00000367076 1113 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PHOX2BQ99453 LEMD1-202ENST00000367151 869 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PHOX2BQ99453 LEMD1-204ENST00000367153 929 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PHOX2BQ99453 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC8.55□□□□□ -1.04
PHOX2BQ99453 MIR217-201ENST00000384817 110 ntBASIC8.55□□□□□ -1.04
PHOX2BQ99453 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PHOX2BQ99453 SNORA11C-201ENST00000408532 129 ntBASIC8.55□□□□□ -1.04
PHOX2BQ99453 SNX18P13-201ENST00000412442 529 ntBASIC8.55□□□□□ -1.04
PHOX2BQ99453 MTND3P17-201ENST00000416968 344 ntBASIC8.55□□□□□ -1.04
PHOX2BQ99453 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC8.55□□□□□ -1.04
PHOX2BQ99453 LINC00630-202ENST00000420471 838 ntTSL 3 BASIC8.55□□□□□ -1.04
PHOX2BQ99453 FYTTD1P1-201ENST00000424250 921 ntBASIC8.55□□□□□ -1.04
PHOX2BQ99453 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
PHOX2BQ99453 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC8.55□□□□□ -1.04
PHOX2BQ99453 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
PHOX2BQ99453 SKP1P3-201ENST00000429280 487 ntBASIC8.55□□□□□ -1.04
PHOX2BQ99453 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC8.55□□□□□ -1.04
PHOX2BQ99453 AL451074.3-201ENST00000437709 472 ntBASIC8.55□□□□□ -1.04
PHOX2BQ99453 HIST1H2APS6-201ENST00000448609 364 ntBASIC8.55□□□□□ -1.04
PHOX2BQ99453 DNAJC19P8-201ENST00000452887 259 ntBASIC8.55□□□□□ -1.04
PHOX2BQ99453 OR7E7P-201ENST00000455678 1012 ntBASIC8.55□□□□□ -1.04
PHOX2BQ99453 RPSAP24-201ENST00000461543 873 ntBASIC8.55□□□□□ -1.04
PHOX2BQ99453 AC005165.2-201ENST00000466070 380 ntBASIC8.55□□□□□ -1.04
PHOX2BQ99453 AC074386.1-201ENST00000476560 767 ntBASIC8.55□□□□□ -1.04
PHOX2BQ99453 KCTD9P5-201ENST00000504141 1170 ntBASIC8.55□□□□□ -1.04
PHOX2BQ99453 CDH12P2-201ENST00000504393 298 ntBASIC8.55□□□□□ -1.04
PHOX2BQ99453 PRPS1L1-201ENST00000506618 1090 ntAPPRIS ALT2 BASIC8.55□□□□□ -1.04
PHOX2BQ99453 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC8.55□□□□□ -1.04
PHOX2BQ99453 JRKL-AS1-201ENST00000511243 426 ntTSL 2 BASIC8.55□□□□□ -1.04
PHOX2BQ99453 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC8.55□□□□□ -1.04
PHOX2BQ99453 HSPA8P13-201ENST00000523715 472 ntBASIC8.55□□□□□ -1.04
PHOX2BQ99453 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC8.55□□□□□ -1.04
PHOX2BQ99453 C17orf80-205ENST00000535032 2129 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
PHOX2BQ99453 EGLN3P1-201ENST00000541727 720 ntBASIC8.55□□□□□ -1.04
PHOX2BQ99453 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC8.55□□□□□ -1.04
PHOX2BQ99453 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC8.55□□□□□ -1.04
PHOX2BQ99453 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC8.55□□□□□ -1.04
PHOX2BQ99453 AC007262.1-201ENST00000604099 321 ntBASIC8.55□□□□□ -1.04
PHOX2BQ99453 AC013553.2-201ENST00000604244 589 ntBASIC8.55□□□□□ -1.04
PHOX2BQ99453 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC8.55□□□□□ -1.04
PHOX2BQ99453 AC093591.3-201ENST00000634516 308 ntBASIC8.55□□□□□ -1.04
PHOX2BQ99453 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC8.55□□□□□ -1.04
PHOX2BQ99453 SMARCA1-203ENST00000371123 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
PHOX2BQ99453 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC8.55□□□□□ -1.04
PHOX2BQ99453 HSPA8P17-201ENST00000427029 1382 ntBASIC8.55□□□□□ -1.04
PHOX2BQ99453 WASF5P-205ENST00000428639 1455 ntBASIC8.55□□□□□ -1.04
PHOX2BQ99453 TRIM60P19-201ENST00000452879 1462 ntBASIC8.55□□□□□ -1.04
PHOX2BQ99453 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
PHOX2BQ99453 SLC11A2-203ENST00000394904 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
PHOX2BQ99453 CRX-207ENST00000613299 4193 ntTSL 3 BASIC8.55□□□□□ -1.04
PHOX2BQ99453 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC8.55□□□□□ -1.04
PHOX2BQ99453 MAGEE1-201ENST00000361470 3630 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
PHOX2BQ99453 TGFB2-201ENST00000366929 5053 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
PHOX2BQ99453 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC8.55□□□□□ -1.04
PHOX2BQ99453 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
PHOX2BQ99453 AC107982.1-201ENST00000507171 1300 ntBASIC8.54□□□□□ -1.04
PHOX2BQ99453 TRIM60P14-201ENST00000513444 1419 ntBASIC8.54□□□□□ -1.04
PHOX2BQ99453 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PHOX2BQ99453 ASNSP6-201ENST00000592770 1618 ntBASIC8.54□□□□□ -1.04
PHOX2BQ99453 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PHOX2BQ99453 ABCA11P-201ENST00000451020 1815 ntTSL 2 BASIC8.54□□□□□ -1.04
PHOX2BQ99453 AC011294.1-202ENST00000451905 1947 ntTSL 2 BASIC8.54□□□□□ -1.04
PHOX2BQ99453 ACSL6-206ENST00000379255 2301 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
PHOX2BQ99453 ENTPD1-AS1-211ENST00000454638 2933 ntTSL 2 BASIC8.54□□□□□ -1.04
PHOX2BQ99453 ARID1A-209ENST00000615191 3804 ntTSL 5 BASIC8.54□□□□□ -1.04
PHOX2BQ99453 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
PHOX2BQ99453 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
PHOX2BQ99453 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PHOX2BQ99453 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
PHOX2BQ99453 SAYSD1-202ENST00000373249 1972 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
PHOX2BQ99453 DBF4P1-201ENST00000412976 1892 ntBASIC8.54□□□□□ -1.04
PHOX2BQ99453 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
PHOX2BQ99453 AC024610.2-205ENST00000584758 1567 ntTSL 5 BASIC8.54□□□□□ -1.04
PHOX2BQ99453 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms