RNA–Protein interactions for RNA: ENST00000320443.12

CARF-201, Transcript of calcium responsive transcription factor, humanhuman

TSL 2 BASIC

Gene CARF, Length 5,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARF-201ENST00000320443 NISCHQ9Y2I1 1504 aa17■□□□□ 0.31
CARF-201ENST00000320443 SHROOM4Q9ULL8 1493 aa15.25■□□□□ 0.03
CARF-201ENST00000320443 SUPT5HO00267 1087 aaKnown RBP15.19■□□□□ 0.02
CARF-201ENST00000320443 DCAF8L2P0C7V8 631 aa15.08■□□□□ 0.01
CARF-201ENST00000320443 PCGF6Q9BYE7 350 aa14.52□□□□□ -0.08
CARF-201ENST00000320443 CHIC1Q5VXU3 224 aa14.45□□□□□ -0.1
CARF-201ENST00000320443 HRCP23327 699 aa14.39□□□□□ -0.11
CARF-201ENST00000320443 ZCCHC6Q5VYS8 1495 aaKnown RBP14.32□□□□□ -0.12
CARF-201ENST00000320443 LOC105371045A0A1W2PR82 267 aa14.18□□□□□ -0.14
CARF-201ENST00000320443 EHMT2Q96KQ7 1210 aa14.17□□□□□ -0.14
CARF-201ENST00000320443 CCDC180Q9P1Z9 1646 aa14.15□□□□□ -0.14
CARF-201ENST00000320443 PPARGC1BQ86YN6 1023 aaKnown RBP14.13□□□□□ -0.15
CARF-201ENST00000320443 FAM9AQ8IZU1 332 aaPredicted RBP14.13□□□□□ -0.15
CARF-201ENST00000320443 MYO15BQ96JP2 1530 aa14.12□□□□□ -0.15
CARF-201ENST00000320443 TRIM41Q8WV44 630 aa14.08□□□□□ -0.16
CARF-201ENST00000320443 TRIM26Q12899 539 aaPredicted RBP14.07□□□□□ -0.16
CARF-201ENST00000320443 ZEB1P37275 1124 aaPredicted RBP13.98□□□□□ -0.17
CARF-201ENST00000320443 DCAF1Q9Y4B6 1507 aa13.9□□□□□ -0.19
CARF-201ENST00000320443 TTBK1Q5TCY1 1321 aaPredicted RBP13.75□□□□□ -0.21
CARF-201ENST00000320443 CCER1Q8TC90 406 aaPredicted RBP13.73□□□□□ -0.21
CARF-201ENST00000320443 SCRIBQ14160 1630 aa13.67□□□□□ -0.22
CARF-201ENST00000320443 PELP1Q8IZL8 1130 aaKnown RBP13.61□□□□□ -0.23
CARF-201ENST00000320443 RSF1Q96T23 1441 aaPredicted RBP13.6□□□□□ -0.23
CARF-201ENST00000320443 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.57□□□□□ -0.24
CARF-201ENST00000320443 ABCC9O60706 1549 aa13.54□□□□□ -0.24
CARF-201ENST00000320443 CENPBP07199 599 aaPredicted RBP13.54□□□□□ -0.24
CARF-201ENST00000320443 UBTFP17480 764 aaKnown RBP13.54□□□□□ -0.24
CARF-201ENST00000320443 APLP2Q06481 763 aa13.47□□□□□ -0.25
CARF-201ENST00000320443 RB1CC1Q8TDY2 1594 aa13.41□□□□□ -0.26
CARF-201ENST00000320443 DIEXFQ68CQ4 756 aaKnown RBP13.4□□□□□ -0.26
CARF-201ENST00000320443 RANGAP1P46060 587 aaPredicted RBP13.39□□□□□ -0.27
CARF-201ENST00000320443 YTHDC1Q96MU7 727 aaKnown RBP13.36□□□□□ -0.27
CARF-201ENST00000320443 SCAF1Q9H7N4 1312 aaKnown RBP13.33□□□□□ -0.28
CARF-201ENST00000320443 CECR2Q9BXF3 1484 aa13.33□□□□□ -0.28
CARF-201ENST00000320443 HNRNPUL2Q1KMD3 747 aaKnown RBP13.3□□□□□ -0.28
CARF-201ENST00000320443 ACIN1Q9UKV3 1341 aaKnown RBP13.29□□□□□ -0.28
CARF-201ENST00000320443 NACADO15069 1562 aa13.25□□□□□ -0.29
CARF-201ENST00000320443 GTF3C3Q9Y5Q9 886 aa13.25□□□□□ -0.29
CARF-201ENST00000320443 MROH2BQ7Z745 1585 aa13.25□□□□□ -0.29
CARF-201ENST00000320443 CSRNP3Q8WYN3 585 aa13.24□□□□□ -0.29
CARF-201ENST00000320443 NEUROD1Q13562 356 aa13.2□□□□□ -0.3
CARF-201ENST00000320443 ZNF316A6NFI3 1004 aaPredicted RBP13.18□□□□□ -0.3
CARF-201ENST00000320443 PABPN1Q86U42 306 aaKnown RBP eCLIP13.18□□□□□ -0.3
CARF-201ENST00000320443 WIZO95785 1651 aa13.15□□□□□ -0.3
CARF-201ENST00000320443 CEP162Q5TB80 1403 aa13.14□□□□□ -0.31
CARF-201ENST00000320443 BAZ1AQ9NRL2 1556 aaPredicted RBP13.12□□□□□ -0.31
CARF-201ENST00000320443 TNIKQ9UKE5 1360 aa13.07□□□□□ -0.32
CARF-201ENST00000320443 MYT1Q01538 1121 aa13.06□□□□□ -0.32
CARF-201ENST00000320443 ABCC8Q09428 1581 aa13.06□□□□□ -0.32
CARF-201ENST00000320443 CCDC88BA6NC98 1476 aa13.04□□□□□ -0.32
CARF-201ENST00000320443 SOGA1O94964 1423 aa13.04□□□□□ -0.32
CARF-201ENST00000320443 EEA1Q15075 1411 aa13.04□□□□□ -0.32
CARF-201ENST00000320443 ITGAEP38570 1179 aa13.02□□□□□ -0.33
CARF-201ENST00000320443 GOLGA3Q08378 1498 aa13.01□□□□□ -0.33
CARF-201ENST00000320443 CLIP1P30622 1438 aa12.96□□□□□ -0.33
CARF-201ENST00000320443 WRNQ14191 1432 aaPredicted RBP eCLIP12.96□□□□□ -0.33
CARF-201ENST00000320443 ATP1B4Q9UN42 357 aaPredicted RBP12.96□□□□□ -0.33
CARF-201ENST00000320443 TOP2AP11388 1531 aaKnown RBP12.96□□□□□ -0.34
CARF-201ENST00000320443 MIER1Q8N108 512 aa12.95□□□□□ -0.34
CARF-201ENST00000320443 CEP164Q9UPV0 1460 aa12.9□□□□□ -0.34
CARF-201ENST00000320443 RUSC2Q8N2Y8 1516 aa12.87□□□□□ -0.35
CARF-201ENST00000320443 SMARCA4P51532 1647 aa12.87□□□□□ -0.35
CARF-201ENST00000320443 SMARCA2P51531 1590 aa12.83□□□□□ -0.35
CARF-201ENST00000320443 NEFLP07196 543 aa12.8□□□□□ -0.36
CARF-201ENST00000320443 VPS8Q8N3P4 1428 aa12.79□□□□□ -0.36
CARF-201ENST00000320443 FAM50AQ14320 339 aaKnown RBP12.77□□□□□ -0.36
CARF-201ENST00000320443 BAZ1BQ9UIG0 1483 aaKnown RBP12.77□□□□□ -0.36
CARF-201ENST00000320443 CLSPNQ9HAW4 1339 aa12.7□□□□□ -0.38
CARF-201ENST00000320443 BCANQ96GW7 911 aa12.7□□□□□ -0.38
CARF-201ENST00000320443 RAPGEF2Q9Y4G8 1499 aa12.69□□□□□ -0.38
CARF-201ENST00000320443 P3H3Q8IVL6 736 aa12.67□□□□□ -0.38
CARF-201ENST00000320443 EIF4G1Q04637 1599 aaKnown RBP12.67□□□□□ -0.38
CARF-201ENST00000320443 KANK4Q5T7N3 995 aaPredicted RBP12.65□□□□□ -0.38
CARF-201ENST00000320443 KIF27Q86VH2 1401 aa12.62□□□□□ -0.39
CARF-201ENST00000320443 DDX10Q13206 875 aaKnown RBP12.62□□□□□ -0.39
CARF-201ENST00000320443 ATAD2BQ9ULI0 1458 aa12.61□□□□□ -0.39
CARF-201ENST00000320443 ANP32CO43423 234 aa12.6□□□□□ -0.39
CARF-201ENST00000320443 SYNJ1O43426 1573 aa12.6□□□□□ -0.39
CARF-201ENST00000320443 KIF21BO75037 1637 aa12.59□□□□□ -0.39
CARF-201ENST00000320443 CCNB3Q8WWL7 1395 aa12.59□□□□□ -0.39
CARF-201ENST00000320443 ERICH6Q7L0X2 663 aa12.58□□□□□ -0.4
CARF-201ENST00000320443 DHX57Q6P158 1386 aaKnown RBP12.58□□□□□ -0.4
CARF-201ENST00000320443 SUPT16HQ9Y5B9 1047 aaKnown RBP12.58□□□□□ -0.4
CARF-201ENST00000320443 FKBP8Q14318 412 aa12.56□□□□□ -0.4
CARF-201ENST00000320443 HIRIP3Q9BW71 556 aaPredicted RBP12.53□□□□□ -0.4
CARF-201ENST00000320443 SIN3AQ96ST3 1273 aa12.5□□□□□ -0.41
CARF-201ENST00000320443 TRIM52Q96A61 297 aa12.49□□□□□ -0.41
CARF-201ENST00000320443 TONSLQ96HA7 1378 aa12.49□□□□□ -0.41
CARF-201ENST00000320443 RAB3GAP2Q9H2M9 1393 aa12.47□□□□□ -0.41
CARF-201ENST00000320443 CUX2O14529 1486 aa12.46□□□□□ -0.41
CARF-201ENST00000320443 UNC13AQ9UPW8 1703 aa12.45□□□□□ -0.42
CARF-201ENST00000320443 SETD5Q9C0A6 1442 aa12.44□□□□□ -0.42
CARF-201ENST00000320443 CARMIL1Q5VZK9 1371 aa12.43□□□□□ -0.42
CARF-201ENST00000320443 BICRAQ9NZM4 1560 aa12.42□□□□□ -0.42
CARF-201ENST00000320443 ARAP1Q96P48 1450 aa12.42□□□□□ -0.42
CARF-201ENST00000320443 CNGB1Q14028 1251 aaPredicted RBP12.42□□□□□ -0.42
CARF-201ENST00000320443 POLR3GLQ9BT43 218 aa12.41□□□□□ -0.42
CARF-201ENST00000320443 TOP2BQ02880 1626 aa12.41□□□□□ -0.42
CARF-201ENST00000320443 KCNH8Q96L42 1107 aa12.41□□□□□ -0.42
CARF-201ENST00000320443 ERICH3Q5RHP9 1530 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms