Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AP001052.1-201ENST00000626421 99 ntBASIC5.66□□□□□ -1.5
CLDN18P56856 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.66□□□□□ -1.5
CLDN18P56856 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.66□□□□□ -1.5
CLDN18P56856 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CLDN18P56856 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN18P56856 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN18P56856 AC062029.1-202ENST00000606164 3651 ntBASIC5.66□□□□□ -1.5
CLDN18P56856 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN18P56856 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN18P56856 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN18P56856 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.66□□□□□ -1.5
CLDN18P56856 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN18P56856 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.66□□□□□ -1.5
CLDN18P56856 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN18P56856 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
CLDN18P56856 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.66□□□□□ -1.5
CLDN18P56856 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN18P56856 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.66□□□□□ -1.5
CLDN18P56856 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLDN18P56856 CAP1P2-201ENST00000417455 1409 ntBASIC5.65□□□□□ -1.5
CLDN18P56856 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLDN18P56856 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
CLDN18P56856 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLDN18P56856 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.65□□□□□ -1.5
CLDN18P56856 AC006213.6-201ENST00000623722 4179 ntBASIC5.65□□□□□ -1.5
CLDN18P56856 AC022905.1-201ENST00000503430 3048 ntBASIC5.65□□□□□ -1.5
CLDN18P56856 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.65□□□□□ -1.5
CLDN18P56856 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
CLDN18P56856 AL731556.1-201ENST00000394628 3711 ntBASIC5.65□□□□□ -1.5
CLDN18P56856 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLDN18P56856 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLDN18P56856 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CLDN18P56856 AL591848.4-201ENST00000567832 3472 ntBASIC5.65□□□□□ -1.5
CLDN18P56856 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.65□□□□□ -1.5
CLDN18P56856 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CLDN18P56856 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CLDN18P56856 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.65□□□□□ -1.5
CLDN18P56856 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.5
CLDN18P56856 AC097721.1-201ENST00000427150 1253 ntBASIC5.65□□□□□ -1.5
CLDN18P56856 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.65□□□□□ -1.5
CLDN18P56856 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.65□□□□□ -1.5
CLDN18P56856 AC007679.3-201ENST00000434035 414 ntBASIC5.65□□□□□ -1.5
CLDN18P56856 AL590399.4-201ENST00000436561 601 ntBASIC5.65□□□□□ -1.5
CLDN18P56856 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.65□□□□□ -1.5
CLDN18P56856 AC117394.1-201ENST00000477323 567 ntBASIC5.65□□□□□ -1.5
CLDN18P56856 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CLDN18P56856 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.65□□□□□ -1.5
CLDN18P56856 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.65□□□□□ -1.5
CLDN18P56856 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.65□□□□□ -1.5
CLDN18P56856 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.65□□□□□ -1.5
CLDN18P56856 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.65□□□□□ -1.5
CLDN18P56856 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.65□□□□□ -1.5
CLDN18P56856 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.65□□□□□ -1.5
CLDN18P56856 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.65□□□□□ -1.5
CLDN18P56856 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5.65□□□□□ -1.5
CLDN18P56856 MIR4701-201ENST00000583094 63 ntBASIC5.65□□□□□ -1.5
CLDN18P56856 AP005136.2-201ENST00000583253 1049 ntBASIC5.65□□□□□ -1.5
CLDN18P56856 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.65□□□□□ -1.5
CLDN18P56856 AL499605.1-201ENST00000604628 403 ntBASIC5.65□□□□□ -1.5
CLDN18P56856 AC010998.3-201ENST00000613871 631 ntBASIC5.65□□□□□ -1.5
CLDN18P56856 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.65□□□□□ -1.5
CLDN18P56856 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.65□□□□□ -1.5
CLDN18P56856 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CLDN18P56856 AL133243.2-201ENST00000610331 1621 ntBASIC5.65□□□□□ -1.51
CLDN18P56856 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.65□□□□□ -1.51
CLDN18P56856 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CLDN18P56856 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CLDN18P56856 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.65□□□□□ -1.51
CLDN18P56856 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
CLDN18P56856 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CLDN18P56856 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CLDN18P56856 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
CLDN18P56856 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CLDN18P56856 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CLDN18P56856 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
CLDN18P56856 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.65□□□□□ -1.51
CLDN18P56856 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
CLDN18P56856 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CLDN18P56856 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.64□□□□□ -1.51
CLDN18P56856 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.64□□□□□ -1.51
CLDN18P56856 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN18P56856 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.64□□□□□ -1.51
CLDN18P56856 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN18P56856 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CLDN18P56856 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.64□□□□□ -1.51
CLDN18P56856 AP000432.2-201ENST00000624164 2048 ntBASIC5.64□□□□□ -1.51
CLDN18P56856 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CLDN18P56856 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.64□□□□□ -1.51
CLDN18P56856 TRAV35-201ENST00000390462 330 ntBASIC5.64□□□□□ -1.51
CLDN18P56856 RAB5CP1-201ENST00000395972 580 ntBASIC5.64□□□□□ -1.51
CLDN18P56856 IGLV3-4-201ENST00000432300 244 ntBASIC5.64□□□□□ -1.51
CLDN18P56856 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.64□□□□□ -1.51
CLDN18P56856 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.64□□□□□ -1.51
CLDN18P56856 MORF4-201ENST00000447135 971 ntBASIC5.64□□□□□ -1.51
CLDN18P56856 OR52I1-201ENST00000450052 1050 ntBASIC5.64□□□□□ -1.51
CLDN18P56856 HIGD1AP16-201ENST00000450986 258 ntBASIC5.64□□□□□ -1.51
CLDN18P56856 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.64□□□□□ -1.51
CLDN18P56856 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.64□□□□□ -1.51
CLDN18P56856 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.64□□□□□ -1.51
CLDN18P56856 AC073581.1-201ENST00000519036 575 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms