Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC099521.1-201ENST00000482557 334 ntBASIC10.55□□□□□ -0.72
CUX2O14529 RN7SL561P-201ENST00000488553 281 ntBASIC10.55□□□□□ -0.72
CUX2O14529 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC10.55□□□□□ -0.72
CUX2O14529 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC10.55□□□□□ -0.72
CUX2O14529 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC10.55□□□□□ -0.72
CUX2O14529 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC10.55□□□□□ -0.72
CUX2O14529 AC025171.4-201ENST00000607250 1047 ntBASIC10.55□□□□□ -0.72
CUX2O14529 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
CUX2O14529 AC007485.2-201ENST00000623493 1667 ntBASIC10.55□□□□□ -0.72
CUX2O14529 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CUX2O14529 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
CUX2O14529 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC10.55□□□□□ -0.72
CUX2O14529 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC10.55□□□□□ -0.72
CUX2O14529 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CUX2O14529 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC10.55□□□□□ -0.72
CUX2O14529 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC10.55□□□□□ -0.72
CUX2O14529 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CUX2O14529 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CUX2O14529 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CUX2O14529 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC10.55□□□□□ -0.72
CUX2O14529 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC10.55□□□□□ -0.72
CUX2O14529 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CUX2O14529 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
CUX2O14529 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC10.55□□□□□ -0.72
CUX2O14529 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CUX2O14529 RNU1-49P-201ENST00000363468 159 ntBASIC10.55□□□□□ -0.72
CUX2O14529 CYB5AP4-201ENST00000396692 399 ntBASIC10.55□□□□□ -0.72
CUX2O14529 AC245028.1-201ENST00000423259 256 ntBASIC10.55□□□□□ -0.72
CUX2O14529 AC005033.1-201ENST00000428904 813 ntBASIC10.55□□□□□ -0.72
CUX2O14529 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC10.55□□□□□ -0.72
CUX2O14529 MORF4L1P5-201ENST00000433352 961 ntBASIC10.55□□□□□ -0.72
CUX2O14529 RAB28P2-201ENST00000454299 641 ntBASIC10.55□□□□□ -0.72
CUX2O14529 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC10.55□□□□□ -0.72
CUX2O14529 AC022206.1-201ENST00000495947 347 ntBASIC10.55□□□□□ -0.72
CUX2O14529 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC10.55□□□□□ -0.72
CUX2O14529 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
CUX2O14529 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CUX2O14529 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CUX2O14529 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
CUX2O14529 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC10.54□□□□□ -0.72
CUX2O14529 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CUX2O14529 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
CUX2O14529 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC10.54□□□□□ -0.72
CUX2O14529 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC10.54□□□□□ -0.72
CUX2O14529 AC011455.2-201ENST00000599320 3336 ntBASIC10.54□□□□□ -0.72
CUX2O14529 OR9K1P-202ENST00000641111 3217 ntBASIC10.54□□□□□ -0.72
CUX2O14529 BX322650.1-201ENST00000332359 2143 ntBASIC10.54□□□□□ -0.72
CUX2O14529 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CUX2O14529 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CUX2O14529 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CUX2O14529 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC10.54□□□□□ -0.72
CUX2O14529 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC10.54□□□□□ -0.72
CUX2O14529 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CUX2O14529 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC10.54□□□□□ -0.72
CUX2O14529 AC245047.1-201ENST00000433276 873 ntBASIC10.54□□□□□ -0.72
CUX2O14529 AL390119.1-201ENST00000440329 312 ntBASIC10.54□□□□□ -0.72
CUX2O14529 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC10.54□□□□□ -0.72
CUX2O14529 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC10.54□□□□□ -0.72
CUX2O14529 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC10.54□□□□□ -0.72
CUX2O14529 AC079075.1-201ENST00000559543 878 ntBASIC10.54□□□□□ -0.72
CUX2O14529 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC10.54□□□□□ -0.72
CUX2O14529 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC10.54□□□□□ -0.72
CUX2O14529 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC10.54□□□□□ -0.72
CUX2O14529 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC10.54□□□□□ -0.72
CUX2O14529 MIR8080-201ENST00000622224 89 ntBASIC10.54□□□□□ -0.72
CUX2O14529 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CUX2O14529 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
CUX2O14529 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC10.53□□□□□ -0.72
CUX2O14529 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CUX2O14529 CASC19-228ENST00000641414 1684 ntBASIC10.53□□□□□ -0.72
CUX2O14529 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
CUX2O14529 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC10.53□□□□□ -0.72
CUX2O14529 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CUX2O14529 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC10.53□□□□□ -0.72
CUX2O14529 MELK-207ENST00000536860 2342 ntTSL 2 BASIC10.53□□□□□ -0.72
CUX2O14529 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC10.53□□□□□ -0.72
CUX2O14529 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
CUX2O14529 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CUX2O14529 NEK2P4-201ENST00000425793 1329 ntBASIC10.53□□□□□ -0.72
CUX2O14529 AL512310.3-201ENST00000547023 1335 ntBASIC10.53□□□□□ -0.72
CUX2O14529 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CUX2O14529 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
CUX2O14529 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CUX2O14529 OR6E1P-201ENST00000414424 923 ntBASIC10.53□□□□□ -0.72
CUX2O14529 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC10.53□□□□□ -0.72
CUX2O14529 OR7E116P-201ENST00000448529 957 ntBASIC10.53□□□□□ -0.72
CUX2O14529 RPL35AP19-201ENST00000469425 329 ntBASIC10.53□□□□□ -0.72
CUX2O14529 RPS17P15-201ENST00000475609 349 ntBASIC10.53□□□□□ -0.72
CUX2O14529 AC024451.1-201ENST00000508013 779 ntBASIC10.53□□□□□ -0.72
CUX2O14529 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC10.53□□□□□ -0.72
CUX2O14529 CASP5-209ENST00000531367 879 ntTSL 5 BASIC10.53□□□□□ -0.72
CUX2O14529 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC10.53□□□□□ -0.72
CUX2O14529 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC10.53□□□□□ -0.72
CUX2O14529 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC10.53□□□□□ -0.72
CUX2O14529 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC10.53□□□□□ -0.72
CUX2O14529 AC005840.5-201ENST00000619166 599 ntBASIC10.53□□□□□ -0.72
CUX2O14529 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC10.53□□□□□ -0.72
CUX2O14529 AC012653.2-201ENST00000621880 420 ntBASIC10.53□□□□□ -0.72
CUX2O14529 AC007683.2-201ENST00000624681 714 ntBASIC10.53□□□□□ -0.72
CUX2O14529 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms