Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC007406.5-201ENST00000570140 3170 ntBASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLCF1Q9UBD9 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 BRD7P1-201ENST00000557705 1915 ntBASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 AL133243.2-201ENST00000610331 1621 ntBASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 MIR1282-201ENST00000408865 101 ntBASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 RN7SKP144-201ENST00000411108 279 ntBASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 MORF4-201ENST00000447135 971 ntBASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 AC009963.3-201ENST00000458090 486 ntBASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 SNX18P26-201ENST00000458433 740 ntBASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 AC103968.1-201ENST00000557841 573 ntBASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 AC079315.1-201ENST00000602952 623 ntBASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 AP001823.1-201ENST00000604056 1003 ntBASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 AC091167.5-201ENST00000605689 894 ntBASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 FAM27E2-201ENST00000619668 403 ntBASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 PABPC1P8-201ENST00000452851 2086 ntBASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLCF1Q9UBD9 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 UGT2B27P-201ENST00000505092 1620 ntBASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 MAPK10-287ENST00000641217 3037 ntBASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 FAM32BP-201ENST00000344033 333 ntBASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 RN7SKP275-201ENST00000364626 301 ntBASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 SNORA77.2-201ENST00000408571 112 ntBASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 AMYP1-201ENST00000440059 1023 ntBASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 RPL34P33-201ENST00000486062 334 ntBASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 RN7SKP35-201ENST00000517210 151 ntBASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 AP001858.2-201ENST00000536213 601 ntBASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 AL591167.1-201ENST00000607321 456 ntBASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 RN7SL261P-201ENST00000613441 282 ntBASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLCF1Q9UBD9 HSPD1P9-201ENST00000420325 1636 ntBASIC5.59□□□□□ -1.52
CLCF1Q9UBD9 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.59□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms