Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC134698.1-201ENST00000511619 643 ntBASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 CYP4F27P-201ENST00000514557 494 ntBASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 RNA5SP206-201ENST00000516703 121 ntBASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 Y_RNA.710-201ENST00000516975 110 ntBASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 TPM3P3-201ENST00000521343 354 ntBASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 AP001858.2-201ENST00000536213 601 ntBASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 RPL41P2-201ENST00000544920 409 ntBASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 CHEK2P2-201ENST00000554701 672 ntBASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 HNRNPCP1-201ENST00000556181 766 ntBASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 RPL7AP69-201ENST00000595306 806 ntBASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 AL138960.1-201ENST00000613838 513 ntBASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 AC078880.4-201ENST00000617627 1749 ntBASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 ZNF969P-201ENST00000510345 2341 ntBASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 RNA5SP375-201ENST00000362975 119 ntBASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 RNU1-49P-201ENST00000363468 159 ntBASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 AL033519.1-201ENST00000407266 307 ntBASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 AC112492.2-201ENST00000432774 1030 ntBASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 RAB28P2-201ENST00000454299 641 ntBASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 AL133351.3-201ENST00000454998 193 ntBASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 TREML3P-201ENST00000457327 501 ntBASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 RARRES2P3-201ENST00000457739 473 ntBASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 SNX18P24-201ENST00000505249 671 ntBASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 MINOS1P4-201ENST00000515470 318 ntBASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 AC068408.1-201ENST00000577406 1144 ntBASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 AP001267.4-201ENST00000602598 545 ntBASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 AL512430.4-201ENST00000603085 613 ntBASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 AC010998.3-201ENST00000613871 631 ntBASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 DNM1P47-203ENST00000571780 12667 ntBASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 AL162456.1-201ENST00000634535 2006 ntBASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
HDHD3Q9BSH5 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.15□□□□□ -1.58
HDHD3Q9BSH5 AC004014.2-201ENST00000623718 5122 ntBASIC5.15□□□□□ -1.58
HDHD3Q9BSH5 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HDHD3Q9BSH5 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.15□□□□□ -1.58
HDHD3Q9BSH5 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HDHD3Q9BSH5 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HDHD3Q9BSH5 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HDHD3Q9BSH5 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HDHD3Q9BSH5 AC009135.2-201ENST00000624136 1768 ntBASIC5.15□□□□□ -1.58
HDHD3Q9BSH5 RNU6-673P-201ENST00000365084 104 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms