Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
HPS5Q9UPZ3 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
HPS5Q9UPZ3 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC9.36□□□□□ -0.91
HPS5Q9UPZ3 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC9.36□□□□□ -0.91
HPS5Q9UPZ3 FBN2-203ENST00000507835 1884 ntTSL 5 BASIC9.36□□□□□ -0.91
HPS5Q9UPZ3 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
HPS5Q9UPZ3 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
HPS5Q9UPZ3 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
HPS5Q9UPZ3 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
HPS5Q9UPZ3 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
HPS5Q9UPZ3 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 AC091940.1-204ENST00000507318 3091 ntTSL 2 BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 DENND2C-201ENST00000393274 6163 ntTSL 5 BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 AC103760.1-201ENST00000521326 1486 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 Y_RNA.453-201ENST00000384223 109 ntBASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 PPIAP23-201ENST00000420099 497 ntBASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 RPSAP1-201ENST00000421328 880 ntBASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 PPIL1P1-201ENST00000423936 499 ntBASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 VDAC2P3-201ENST00000430995 828 ntBASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 AC098828.1-201ENST00000436164 440 ntBASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 RPS7P4-201ENST00000444127 582 ntBASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 AC239860.1-201ENST00000444680 1270 ntBASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 MEF2AP1-201ENST00000454867 863 ntBASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 MARK2P10-201ENST00000454959 1437 ntBASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 YAP1P2-201ENST00000455104 610 ntBASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 RPL34P22-201ENST00000468193 318 ntBASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 AL122013.1-201ENST00000473054 801 ntBASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 AC069528.1-202ENST00000482888 637 ntBASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 RNF138P1-201ENST00000502765 546 ntBASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 AC011352.3-201ENST00000505162 593 ntBASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 RFESD-208ENST00000513950 464 ntTSL 5 BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 Y_RNA.675-201ENST00000516389 149 ntBASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 AC087203.2-201ENST00000526502 1587 ntBASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 AP000435.1-201ENST00000528539 496 ntBASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 DEFB130C-202ENST00000530001 230 ntBASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 AC020549.1-201ENST00000536916 1440 ntBASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 PSMA3P-201ENST00000555485 635 ntBASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 RPL23AP77-201ENST00000588044 463 ntBASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 AC008770.1-206ENST00000589551 523 ntTSL 3 BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 AP001554.1-201ENST00000604533 376 ntBASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 SETD7-207ENST00000608958 5281 ntTSL 5 BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 TNPO3-202ENST00000471166 3019 ntTSL 5 BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 AMYH02020865.1-201ENST00000621140 2591 ntTSL 2 BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 AL109811.1-201ENST00000452378 2682 ntTSL 2 BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 EPS15P1-202ENST00000459691 2071 ntBASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
HPS5Q9UPZ3 Z99496.1-201ENST00000469424 1477 ntBASIC9.34□□□□□ -0.91
HPS5Q9UPZ3 TNIK-210ENST00000470834 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
HPS5Q9UPZ3 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
HPS5Q9UPZ3 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC9.34□□□□□ -0.91
HPS5Q9UPZ3 CLIP1-218ENST00000545889 4633 ntTSL 5 BASIC9.34□□□□□ -0.91
HPS5Q9UPZ3 GALNTL5-201ENST00000392800 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
HPS5Q9UPZ3 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
HPS5Q9UPZ3 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
HPS5Q9UPZ3 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
HPS5Q9UPZ3 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
HPS5Q9UPZ3 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC9.34□□□□□ -0.91
HPS5Q9UPZ3 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
HPS5Q9UPZ3 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
HPS5Q9UPZ3 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
HPS5Q9UPZ3 AL034417.1-201ENST00000399343 800 ntBASIC9.34□□□□□ -0.91
HPS5Q9UPZ3 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC9.34□□□□□ -0.91
HPS5Q9UPZ3 TAF9BP2-201ENST00000400856 499 ntBASIC9.34□□□□□ -0.91
HPS5Q9UPZ3 COX6A1P3-201ENST00000404167 293 ntBASIC9.34□□□□□ -0.91
HPS5Q9UPZ3 GAS8-AS1-201ENST00000408886 435 ntBASIC9.34□□□□□ -0.91
HPS5Q9UPZ3 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC9.34□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms