RNA–Protein interactions for RNA: ENST00000546563.1

AC068993.2-201, humanhuman

TSL 5 BASIC

Gene AC068993.2, Length 395 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC068993.2-201ENST00000546563 AEBP2Q6ZN18 517 aaPredicted RBP22.98■■□□□ 1.27
AC068993.2-201ENST00000546563 CHIC1Q5VXU3 224 aa22.13■■□□□ 1.13
AC068993.2-201ENST00000546563 PHF23Q9BUL5 403 aaPredicted RBP19.62■□□□□ 0.73
AC068993.2-201ENST00000546563 SENP3Q9H4L4 574 aaPredicted RBP19.22■□□□□ 0.67
AC068993.2-201ENST00000546563 FOXD1Q16676 465 aa18.06■□□□□ 0.48
AC068993.2-201ENST00000546563 PLPPR3Q6T4P5 718 aa17.79■□□□□ 0.44
AC068993.2-201ENST00000546563 PPP6R1Q9UPN7 881 aa17.38■□□□□ 0.37
AC068993.2-201ENST00000546563 ADRA2BP18089 450 aa17.29■□□□□ 0.36
AC068993.2-201ENST00000546563 PIAS4Q8N2W9 510 aaPredicted RBP16.88■□□□□ 0.29
AC068993.2-201ENST00000546563 MSH5O43196 834 aa16.47■□□□□ 0.23
AC068993.2-201ENST00000546563 MAPK8IP2Q13387 824 aaPredicted RBP15.78■□□□□ 0.12
AC068993.2-201ENST00000546563 PPP4R3CPQ6ZMV5 832 aa15.76■□□□□ 0.11
AC068993.2-201ENST00000546563 SCAF1Q9H7N4 1312 aaKnown RBP15.47■□□□□ 0.07
AC068993.2-201ENST00000546563 POTEDQ86YR6 584 aa15.44■□□□□ 0.06
AC068993.2-201ENST00000546563 DMRT2Q9Y5R5 561 aa15.41■□□□□ 0.06
AC068993.2-201ENST00000546563 KCNA4P22459 653 aa15.34■□□□□ 0.05
AC068993.2-201ENST00000546563 CNKSR2Q8WXI2 1034 aa15.26■□□□□ 0.03
AC068993.2-201ENST00000546563 NPM3O75607 178 aaKnown RBP15.13■□□□□ 0.01
AC068993.2-201ENST00000546563 NCBP3Q53F19 620 aaKnown RBP15.1■□□□□ 0.01
AC068993.2-201ENST00000546563 HOXD11P31277 338 aaPredicted RBP15.05■□□□□ -0
AC068993.2-201ENST00000546563 RNF216Q9NWF9 866 aaPredicted RBP15.01□□□□□ -0.01
AC068993.2-201ENST00000546563 DCAF8L1A6NGE4 600 aa14.68□□□□□ -0.06
AC068993.2-201ENST00000546563 DNAJC5BQ9UF47 199 aa14.61□□□□□ -0.07
AC068993.2-201ENST00000546563 SLC4A1APQ9BWU0 796 aaKnown RBP14.44□□□□□ -0.1
AC068993.2-201ENST00000546563 SLC4A2P04920 1241 aa14.4□□□□□ -0.1
AC068993.2-201ENST00000546563 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.24□□□□□ -0.13
AC068993.2-201ENST00000546563 RNF39Q9H2S5 420 aa14.24□□□□□ -0.13
AC068993.2-201ENST00000546563 ZBTB22O15209 634 aa14.22□□□□□ -0.13
AC068993.2-201ENST00000546563 U3KPZ7 1027 aaPredicted RBP14.16□□□□□ -0.14
AC068993.2-201ENST00000546563 FOXD4L1Q9NU39 408 aa14.01□□□□□ -0.17
AC068993.2-201ENST00000546563 EHMT2Q96KQ7 1210 aa13.95□□□□□ -0.18
AC068993.2-201ENST00000546563 C1QBPQ07021 282 aaKnown RBP13.94□□□□□ -0.18
AC068993.2-201ENST00000546563 CSRNP3Q8WYN3 585 aa13.93□□□□□ -0.18
AC068993.2-201ENST00000546563 CACNB1Q02641 598 aaPredicted RBP13.89□□□□□ -0.19
AC068993.2-201ENST00000546563 MYCNP04198 464 aaPredicted RBP13.84□□□□□ -0.19
AC068993.2-201ENST00000546563 SPINK5Q9NQ38 1064 aaPredicted RBP13.84□□□□□ -0.19
AC068993.2-201ENST00000546563 ATF5Q9Y2D1 282 aaPredicted RBP13.75□□□□□ -0.21
AC068993.2-201ENST00000546563 SAMD1Q6SPF0 538 aaPredicted RBP13.64□□□□□ -0.23
AC068993.2-201ENST00000546563 CAPN15O75808 1086 aa13.63□□□□□ -0.23
AC068993.2-201ENST00000546563 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.61□□□□□ -0.23
AC068993.2-201ENST00000546563 HNRNPUL2Q1KMD3 747 aaKnown RBP13.61□□□□□ -0.23
AC068993.2-201ENST00000546563 TRHP20396 242 aaPredicted RBP13.57□□□□□ -0.24
AC068993.2-201ENST00000546563 DSG3P32926 999 aa13.52□□□□□ -0.25
AC068993.2-201ENST00000546563 ABCB7O75027 752 aa13.47□□□□□ -0.25
AC068993.2-201ENST00000546563 ATXN8OSP0DMR3 200 aa13.45□□□□□ -0.26
AC068993.2-201ENST00000546563 APLP2Q06481 763 aa13.43□□□□□ -0.26
AC068993.2-201ENST00000546563 ZNF219Q9P2Y4 722 aaPredicted RBP13.43□□□□□ -0.26
AC068993.2-201ENST00000546563 POLA2Q14181 598 aa13.34□□□□□ -0.27
AC068993.2-201ENST00000546563 MKRN4PQ13434 485 aaPredicted RBP13.11□□□□□ -0.31
AC068993.2-201ENST00000546563 OSCARQ8IYS5 282 aa12.92□□□□□ -0.34
AC068993.2-201ENST00000546563 ZBTB12Q9Y330 459 aaPredicted RBP12.88□□□□□ -0.35
AC068993.2-201ENST00000546563 FBLN2P98095 1184 aa12.83□□□□□ -0.36
AC068993.2-201ENST00000546563 RBM42Q9BTD8 480 aaKnown RBP12.66□□□□□ -0.38
AC068993.2-201ENST00000546563 SPDYE2BA6NHP3 402 aa12.64□□□□□ -0.39
AC068993.2-201ENST00000546563 SPDYE6P0CI01 402 aa12.64□□□□□ -0.39
AC068993.2-201ENST00000546563 SPDYE2Q495Y8 402 aa12.64□□□□□ -0.39
AC068993.2-201ENST00000546563 SSUH2Q9Y2M2 353 aa12.64□□□□□ -0.39
AC068993.2-201ENST00000546563 ZNF692Q9BU19 519 aaPredicted RBP12.6□□□□□ -0.39
AC068993.2-201ENST00000546563 AKT1S1Q96B36 256 aa12.58□□□□□ -0.4
AC068993.2-201ENST00000546563 SPDYE4A6NLX3 237 aa12.57□□□□□ -0.4
AC068993.2-201ENST00000546563 REM2Q8IYK8 340 aaPredicted RBP12.55□□□□□ -0.4
AC068993.2-201ENST00000546563 FKBP8Q14318 412 aa12.5□□□□□ -0.41
AC068993.2-201ENST00000546563 PABPN1Q86U42 306 aaKnown RBP eCLIP12.48□□□□□ -0.41
AC068993.2-201ENST00000546563 PITPNM1O00562 1244 aa12.44□□□□□ -0.42
AC068993.2-201ENST00000546563 PROM2Q8N271 834 aa12.44□□□□□ -0.42
AC068993.2-201ENST00000546563 CHRDL2Q6WN34 429 aa12.34□□□□□ -0.43
AC068993.2-201ENST00000546563 CLEC11AQ9Y240 323 aa12.29□□□□□ -0.44
AC068993.2-201ENST00000546563 SPDYE1Q8NFV5 336 aaPredicted RBP12.28□□□□□ -0.44
AC068993.2-201ENST00000546563 PIP4P2Q8N4L2 257 aa12.22□□□□□ -0.45
AC068993.2-201ENST00000546563 FXR2P51116 673 aaKnown RBP eCLIP12.21□□□□□ -0.45
AC068993.2-201ENST00000546563 CHADLQ6NUI6 762 aa12.15□□□□□ -0.46
AC068993.2-201ENST00000546563 POTEHQ6S545 545 aa12.13□□□□□ -0.47
AC068993.2-201ENST00000546563 PRR29P0C7W0 189 aa12.12□□□□□ -0.47
AC068993.2-201ENST00000546563 CREBZFQ9NS37 354 aa12.09□□□□□ -0.47
AC068993.2-201ENST00000546563 PRKAR2AP13861 404 aaKnown RBP12.07□□□□□ -0.48
AC068993.2-201ENST00000546563 STAG3Q9UJ98 1225 aa12.07□□□□□ -0.48
AC068993.2-201ENST00000546563 MNX1P50219 401 aaPredicted RBP12□□□□□ -0.49
AC068993.2-201ENST00000546563 EVX2Q03828 476 aa11.92□□□□□ -0.5
AC068993.2-201ENST00000546563 FARP1Q9Y4F1 1045 aaPredicted RBP11.92□□□□□ -0.5
AC068993.2-201ENST00000546563 VASPP50552 380 aaPredicted RBP11.9□□□□□ -0.5
AC068993.2-201ENST00000546563 MIER1Q8N108 512 aa11.9□□□□□ -0.5
AC068993.2-201ENST00000546563 FBXO3Q9UK99 471 aa11.89□□□□□ -0.51
AC068993.2-201ENST00000546563 IFNLR1Q8IU57 520 aaPredicted RBP11.83□□□□□ -0.52
AC068993.2-201ENST00000546563 PLCD3Q8N3E9 789 aa11.82□□□□□ -0.52
AC068993.2-201ENST00000546563 C19orf67A6NJJ6 358 aa11.8□□□□□ -0.52
AC068993.2-201ENST00000546563 HAX1O00165 279 aa11.77□□□□□ -0.53
AC068993.2-201ENST00000546563 NUBP1P53384 320 aa11.73□□□□□ -0.53
AC068993.2-201ENST00000546563 RASEFQ8IZ41 740 aa11.73□□□□□ -0.53
AC068993.2-201ENST00000546563 CD44P16070 742 aaKnown RBP11.69□□□□□ -0.54
AC068993.2-201ENST00000546563 NPM1P06748 294 aaKnown RBP eCLIP11.64□□□□□ -0.55
AC068993.2-201ENST00000546563 KLHL34Q8N239 644 aa11.64□□□□□ -0.55
AC068993.2-201ENST00000546563 TSPYL2Q9H2G4 693 aaPredicted RBP11.62□□□□□ -0.55
AC068993.2-201ENST00000546563 ZRANB1Q9UGI0 708 aa11.62□□□□□ -0.55
AC068993.2-201ENST00000546563 PLEKHG5O94827 1062 aa11.61□□□□□ -0.55
AC068993.2-201ENST00000546563 PHF12Q96QT6 1004 aa11.6□□□□□ -0.55
AC068993.2-201ENST00000546563 SP7Q8TDD2 431 aaPredicted RBP11.58□□□□□ -0.56
AC068993.2-201ENST00000546563 CCDC61Q9Y6R9 512 aa11.58□□□□□ -0.56
AC068993.2-201ENST00000546563 SPOCK2Q92563 424 aa11.56□□□□□ -0.56
AC068993.2-201ENST00000546563 ZBTB47Q9UFB7 747 aaPredicted RBP11.56□□□□□ -0.56
AC068993.2-201ENST00000546563 ZNF579Q8NAF0 562 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms