Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 BBS9-203ENST00000355070 4004 ntAPPRIS P3 TSL 5 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 ZNF33A-208ENST00000628825 2854 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 AP000552.1-202ENST00000436681 3714 ntTSL 5 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 NRXN3-202ENST00000335750 2764 ntTSL 5 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 RUFY3-204ENST00000502653 2342 ntTSL 2 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 C2orf91-201ENST00000378711 3721 ntAPPRIS P2 TSL 2 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 IMMT-201ENST00000254636 2613 ntTSL 5 BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 PSEN1-205ENST00000406768 4062 ntTSL 2 BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 AL355852.1-201ENST00000454081 1771 ntBASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 ZNF366-201ENST00000318442 3830 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 HKR1-202ENST00000392153 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 ABCB1-211ENST00000622132 4778 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 TCF7-202ENST00000378560 2929 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 OR8D4-202ENST00000641687 2904 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 AC008938.1-201ENST00000566929 6510 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 CSGALNACT1-201ENST00000332246 3872 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 ZNF23-202ENST00000358700 2692 ntTSL 5 BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 AC217777.1-201ENST00000570034 1471 ntBASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 OR56B2P-201ENST00000317102 954 ntBASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 Y_RNA.144-201ENST00000363521 113 ntBASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 RNY3P10-201ENST00000384764 102 ntBASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 AL079342.2-201ENST00000403367 482 ntBASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 AL022329.1-201ENST00000412773 488 ntTSL 2 BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 RPL21P111-201ENST00000418453 477 ntBASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 CNOT7P1-201ENST00000429006 852 ntBASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 AC128677.1-201ENST00000436016 442 ntBASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 AL137074.1-201ENST00000442640 465 ntBASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 AC234771.2-201ENST00000445718 597 ntBASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 RN7SL55P-201ENST00000464534 297 ntBASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 NACAP6-201ENST00000509572 622 ntBASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 AC018797.1-201ENST00000510791 255 ntBASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 RN7SL230P-201ENST00000580835 303 ntBASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 MIR4732-201ENST00000581873 76 ntBASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 AL050343.2-201ENST00000607338 280 ntBASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 AL442067.1-201ENST00000613261 223 ntBASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 AL512624.1-201ENST00000613638 469 ntBASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 LINC01299-201ENST00000520902 2634 ntTSL 2 BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 LOXHD1-212ENST00000582408 3755 ntTSL 2 BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 TRAF1-203ENST00000546084 3715 ntTSL 2 BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 CTPS2-202ENST00000380241 3526 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 TRPM3-210ENST00000377111 4618 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 AC020658.3-201ENST00000568093 4028 ntBASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 ENO1P4-201ENST00000416471 1785 ntBASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 AL513548.3-201ENST00000611708 2865 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
COL25A1Q9BXS0 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
COL25A1Q9BXS0 TKTL2-201ENST00000280605 2654 ntAPPRIS P1 BASIC7.84□□□□□ -1.16
COL25A1Q9BXS0 PAPD4-202ENST00000423041 3223 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.16
COL25A1Q9BXS0 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
COL25A1Q9BXS0 DLGAP1-AS2-201ENST00000572856 2261 ntTSL 2 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 ZNF750-201ENST00000269394 3713 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 MAP3K7CL-202ENST00000339024 2066 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 MAP3K7CL-208ENST00000399935 2093 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 PTPRM-202ENST00000400053 5292 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 FAM74A4-203ENST00000621724 1862 ntTSL 2 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 COL10A1-201ENST00000243222 3289 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 NXF5-205ENST00000473265 1348 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 MOV10-202ENST00000369644 4100 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 AP002001.2-201ENST00000529025 1469 ntBASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 AC008543.1-201ENST00000344893 3383 ntTSL 2 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 BCO2-208ENST00000526088 1983 ntTSL 2 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 Y_RNA.9-201ENST00000362354 101 ntBASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 RN7SKP237-201ENST00000364663 301 ntBASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms