Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC8.6□□□□□ -1.03
PTCH1Q13635 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
PTCH1Q13635 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
PTCH1Q13635 RN7SKP162-201ENST00000363605 345 ntBASIC8.6□□□□□ -1.03
PTCH1Q13635 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC8.6□□□□□ -1.03
PTCH1Q13635 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC8.6□□□□□ -1.03
PTCH1Q13635 PFN1P6-201ENST00000476786 399 ntBASIC8.6□□□□□ -1.03
PTCH1Q13635 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC8.6□□□□□ -1.03
PTCH1Q13635 AC084337.1-201ENST00000524809 686 ntBASIC8.6□□□□□ -1.03
PTCH1Q13635 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC8.6□□□□□ -1.03
PTCH1Q13635 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PTCH1Q13635 MAPK10-365ENST00000641902 3825 ntBASIC8.6□□□□□ -1.03
PTCH1Q13635 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC8.6□□□□□ -1.03
PTCH1Q13635 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC8.6□□□□□ -1.03
PTCH1Q13635 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
PTCH1Q13635 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
PTCH1Q13635 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC8.6□□□□□ -1.03
PTCH1Q13635 AC007342.5-201ENST00000571340 2142 ntBASIC8.59□□□□□ -1.03
PTCH1Q13635 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PTCH1Q13635 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC8.59□□□□□ -1.03
PTCH1Q13635 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC8.59□□□□□ -1.03
PTCH1Q13635 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PTCH1Q13635 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
PTCH1Q13635 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PTCH1Q13635 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
PTCH1Q13635 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PTCH1Q13635 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
PTCH1Q13635 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC8.59□□□□□ -1.03
PTCH1Q13635 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PTCH1Q13635 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
PTCH1Q13635 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PTCH1Q13635 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC8.59□□□□□ -1.03
PTCH1Q13635 SNORA64.1-201ENST00000362600 132 ntBASIC8.59□□□□□ -1.03
PTCH1Q13635 AL391422.1-201ENST00000402155 436 ntBASIC8.59□□□□□ -1.03
PTCH1Q13635 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC8.59□□□□□ -1.03
PTCH1Q13635 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC8.59□□□□□ -1.03
PTCH1Q13635 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PTCH1Q13635 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC8.59□□□□□ -1.03
PTCH1Q13635 AC091078.2-201ENST00000557145 559 ntBASIC8.59□□□□□ -1.03
PTCH1Q13635 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC8.59□□□□□ -1.03
PTCH1Q13635 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PTCH1Q13635 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC8.59□□□□□ -1.03
PTCH1Q13635 AC020765.1-201ENST00000604296 328 ntBASIC8.59□□□□□ -1.03
PTCH1Q13635 AL589674.2-201ENST00000604304 337 ntBASIC8.59□□□□□ -1.03
PTCH1Q13635 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
PTCH1Q13635 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC8.59□□□□□ -1.03
PTCH1Q13635 AC027279.4-201ENST00000624371 2072 ntBASIC8.59□□□□□ -1.03
PTCH1Q13635 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PTCH1Q13635 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PTCH1Q13635 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC8.59□□□□□ -1.03
PTCH1Q13635 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC8.59□□□□□ -1.03
PTCH1Q13635 AC092111.1-201ENST00000618256 3358 ntBASIC8.59□□□□□ -1.04
PTCH1Q13635 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
PTCH1Q13635 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PTCH1Q13635 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PTCH1Q13635 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
PTCH1Q13635 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PTCH1Q13635 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
PTCH1Q13635 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
PTCH1Q13635 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC8.58□□□□□ -1.04
PTCH1Q13635 Y_RNA.625-201ENST00000411256 107 ntBASIC8.58□□□□□ -1.04
PTCH1Q13635 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC8.58□□□□□ -1.04
PTCH1Q13635 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC8.58□□□□□ -1.04
PTCH1Q13635 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC8.58□□□□□ -1.04
PTCH1Q13635 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC8.58□□□□□ -1.04
PTCH1Q13635 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC8.58□□□□□ -1.04
PTCH1Q13635 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC8.58□□□□□ -1.04
PTCH1Q13635 NENFP3-201ENST00000503735 313 ntBASIC8.58□□□□□ -1.04
PTCH1Q13635 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC8.58□□□□□ -1.04
PTCH1Q13635 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PTCH1Q13635 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC8.58□□□□□ -1.04
PTCH1Q13635 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC8.58□□□□□ -1.04
PTCH1Q13635 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC8.58□□□□□ -1.04
PTCH1Q13635 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC8.58□□□□□ -1.04
PTCH1Q13635 AC015802.2-201ENST00000589690 189 ntBASIC8.58□□□□□ -1.04
PTCH1Q13635 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC8.58□□□□□ -1.04
PTCH1Q13635 AC139493.1-201ENST00000604368 397 ntBASIC8.58□□□□□ -1.04
PTCH1Q13635 OR7A1P-202ENST00000641542 1158 ntBASIC8.58□□□□□ -1.04
PTCH1Q13635 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PTCH1Q13635 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PTCH1Q13635 AC009120.2-204ENST00000621548 2032 ntBASIC8.58□□□□□ -1.04
PTCH1Q13635 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC8.58□□□□□ -1.04
PTCH1Q13635 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PTCH1Q13635 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PTCH1Q13635 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PTCH1Q13635 RPS2P45-201ENST00000469997 2057 ntBASIC8.58□□□□□ -1.04
PTCH1Q13635 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PTCH1Q13635 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PTCH1Q13635 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC8.58□□□□□ -1.04
PTCH1Q13635 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
PTCH1Q13635 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC8.57□□□□□ -1.04
PTCH1Q13635 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PTCH1Q13635 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
PTCH1Q13635 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC8.57□□□□□ -1.04
PTCH1Q13635 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
PTCH1Q13635 RNU1-24P-201ENST00000364285 165 ntBASIC8.57□□□□□ -1.04
PTCH1Q13635 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
PTCH1Q13635 SPTLC1P2-201ENST00000407089 121 ntBASIC8.57□□□□□ -1.04
PTCH1Q13635 BMS1P17-202ENST00000416720 316 ntBASIC8.57□□□□□ -1.04
PTCH1Q13635 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms