Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDH1P12830 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CDH1P12830 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CDH1P12830 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDH1P12830 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH1P12830 RN7SKP161-201ENST00000411110 305 ntBASIC6.2□□□□□ -1.42
CDH1P12830 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH1P12830 AC012497.1-201ENST00000429392 575 ntBASIC6.2□□□□□ -1.42
CDH1P12830 OR6R1P-201ENST00000431838 940 ntBASIC6.2□□□□□ -1.42
CDH1P12830 MED28P4-201ENST00000433137 572 ntBASIC6.2□□□□□ -1.42
CDH1P12830 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.2□□□□□ -1.42
CDH1P12830 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.2□□□□□ -1.42
CDH1P12830 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.2□□□□□ -1.42
CDH1P12830 RN7SL393P-201ENST00000463588 296 ntBASIC6.2□□□□□ -1.42
CDH1P12830 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CDH1P12830 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.2□□□□□ -1.42
CDH1P12830 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH1P12830 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.2□□□□□ -1.42
CDH1P12830 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH1P12830 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH1P12830 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH1P12830 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC6.2□□□□□ -1.42
CDH1P12830 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.2□□□□□ -1.42
CDH1P12830 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC6.2□□□□□ -1.42
CDH1P12830 AC024589.2-201ENST00000605642 1294 ntBASIC6.2□□□□□ -1.42
CDH1P12830 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.2□□□□□ -1.42
CDH1P12830 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.2□□□□□ -1.42
CDH1P12830 GAPDHP41-201ENST00000613707 975 ntBASIC6.2□□□□□ -1.42
CDH1P12830 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CDH1P12830 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CDH1P12830 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDH1P12830 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.2□□□□□ -1.42
CDH1P12830 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.2□□□□□ -1.42
CDH1P12830 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.2□□□□□ -1.42
CDH1P12830 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDH1P12830 AC123769.1-201ENST00000530992 3192 ntBASIC6.2□□□□□ -1.42
CDH1P12830 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH1P12830 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDH1P12830 AC011815.2-201ENST00000618230 2021 ntBASIC6.2□□□□□ -1.42
CDH1P12830 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.2□□□□□ -1.42
CDH1P12830 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.2□□□□□ -1.42
CDH1P12830 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
CDH1P12830 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.19□□□□□ -1.42
CDH1P12830 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH1P12830 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.19□□□□□ -1.42
CDH1P12830 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDH1P12830 AC011369.2-201ENST00000624423 1567 ntBASIC6.19□□□□□ -1.42
CDH1P12830 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDH1P12830 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH1P12830 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDH1P12830 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CDH1P12830 SNORA64.3-201ENST00000365647 134 ntBASIC6.19□□□□□ -1.42
CDH1P12830 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDH1P12830 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH1P12830 MIR551B-201ENST00000384984 96 ntBASIC6.19□□□□□ -1.42
CDH1P12830 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
CDH1P12830 VIM2P-201ENST00000402383 1294 ntBASIC6.19□□□□□ -1.42
CDH1P12830 RN7SKP129-201ENST00000410288 299 ntBASIC6.19□□□□□ -1.42
CDH1P12830 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC6.19□□□□□ -1.42
CDH1P12830 GPN3P1-201ENST00000423883 535 ntBASIC6.19□□□□□ -1.42
CDH1P12830 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.19□□□□□ -1.42
CDH1P12830 GAPDHP19-201ENST00000431768 1005 ntBASIC6.19□□□□□ -1.42
CDH1P12830 UBE2V2P3-201ENST00000433562 437 ntBASIC6.19□□□□□ -1.42
CDH1P12830 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH1P12830 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CDH1P12830 VN1R38P-201ENST00000450265 887 ntBASIC6.19□□□□□ -1.42
CDH1P12830 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
CDH1P12830 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CDH1P12830 SNRPCP11-201ENST00000492453 205 ntBASIC6.19□□□□□ -1.42
CDH1P12830 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.19□□□□□ -1.42
CDH1P12830 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.19□□□□□ -1.42
CDH1P12830 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.19□□□□□ -1.42
CDH1P12830 IGKV1D-22-201ENST00000518953 324 ntBASIC6.19□□□□□ -1.42
CDH1P12830 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.19□□□□□ -1.42
CDH1P12830 RPL41P2-201ENST00000544920 409 ntBASIC6.19□□□□□ -1.42
CDH1P12830 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.19□□□□□ -1.42
CDH1P12830 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH1P12830 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.19□□□□□ -1.42
CDH1P12830 AC023968.1-201ENST00000560719 475 ntBASIC6.19□□□□□ -1.42
CDH1P12830 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.19□□□□□ -1.42
CDH1P12830 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH1P12830 AC025283.1-201ENST00000572039 734 ntBASIC6.19□□□□□ -1.42
CDH1P12830 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.19□□□□□ -1.42
CDH1P12830 AC090616.1-201ENST00000583895 447 ntBASIC6.19□□□□□ -1.42
CDH1P12830 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.19□□□□□ -1.42
CDH1P12830 AC073046.2-201ENST00000604756 527 ntBASIC6.19□□□□□ -1.42
CDH1P12830 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.19□□□□□ -1.42
CDH1P12830 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.19□□□□□ -1.42
CDH1P12830 AC007603.3-201ENST00000636915 979 ntBASIC6.19□□□□□ -1.42
CDH1P12830 AC105235.1-201ENST00000623208 1816 ntBASIC6.19□□□□□ -1.42
CDH1P12830 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH1P12830 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDH1P12830 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH1P12830 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDH1P12830 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH1P12830 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDH1P12830 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.19□□□□□ -1.42
CDH1P12830 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CDH1P12830 NR1H5P-201ENST00000452683 1377 ntBASIC6.18□□□□□ -1.42
CDH1P12830 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms