Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 AC110597.1-201ENST00000562669 3176 ntBASIC5.82□□□□□ -1.48
CHD8Q9HCK8 AK4P4-201ENST00000419465 646 ntBASIC5.82□□□□□ -1.48
CHD8Q9HCK8 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 AC127526.2-201ENST00000426436 775 ntBASIC5.82□□□□□ -1.48
CHD8Q9HCK8 AC005033.1-201ENST00000428904 813 ntBASIC5.82□□□□□ -1.48
CHD8Q9HCK8 LINC01718-201ENST00000441660 391 ntTSL 2 BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.82□□□□□ -1.48
CHD8Q9HCK8 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 AL049779.2-201ENST00000553847 315 ntBASIC5.82□□□□□ -1.48
CHD8Q9HCK8 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.82□□□□□ -1.48
CHD8Q9HCK8 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 GPBP1-208ENST00000514387 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC5.82□□□□□ -1.48
CHD8Q9HCK8 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 DAZ2-207ENST00000382449 3791 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 RNU1-106P-201ENST00000384382 164 ntBASIC5.81□□□□□ -1.48
CHD8Q9HCK8 AC005042.1-201ENST00000393397 800 ntBASIC5.81□□□□□ -1.48
CHD8Q9HCK8 RPL24P7-201ENST00000399435 453 ntBASIC5.81□□□□□ -1.48
CHD8Q9HCK8 RPL35AP24-201ENST00000413846 330 ntBASIC5.81□□□□□ -1.48
CHD8Q9HCK8 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 AC019205.1-201ENST00000421830 730 ntBASIC5.81□□□□□ -1.48
CHD8Q9HCK8 AL389915.1-201ENST00000422463 466 ntBASIC5.81□□□□□ -1.48
CHD8Q9HCK8 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 OR7E116P-201ENST00000448529 957 ntBASIC5.81□□□□□ -1.48
CHD8Q9HCK8 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 EIF1P7-201ENST00000487533 337 ntBASIC5.81□□□□□ -1.48
CHD8Q9HCK8 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 MIR4436B2-201ENST00000581415 91 ntBASIC5.81□□□□□ -1.48
CHD8Q9HCK8 MIR4436B1-201ENST00000583272 91 ntBASIC5.81□□□□□ -1.48
CHD8Q9HCK8 AC133644.2-201ENST00000608142 540 ntBASIC5.81□□□□□ -1.48
CHD8Q9HCK8 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 AP004289.1-201ENST00000436307 2205 ntBASIC5.81□□□□□ -1.48
CHD8Q9HCK8 HMGN1P6-201ENST00000438508 291 ntBASIC5.81□□□□□ -1.48
CHD8Q9HCK8 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 AC079841.1-201ENST00000481228 950 ntBASIC5.81□□□□□ -1.48
CHD8Q9HCK8 RN7SL97P-201ENST00000486780 299 ntBASIC5.81□□□□□ -1.48
CHD8Q9HCK8 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 HPRT1P1-201ENST00000509498 657 ntBASIC5.81□□□□□ -1.48
CHD8Q9HCK8 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 AC007683.2-201ENST00000624681 714 ntBASIC5.81□□□□□ -1.48
CHD8Q9HCK8 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 LINC01568-201ENST00000554640 2544 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 MTHFD1-202ENST00000545908 6814 ntTSL 2 BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHD8Q9HCK8 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 NEK2P2-201ENST00000438441 1338 ntBASIC5.8□□□□□ -1.48
CHD8Q9HCK8 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 AC006946.1-201ENST00000429106 328 ntBASIC5.8□□□□□ -1.48
CHD8Q9HCK8 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 AL121579.2-201ENST00000555466 590 ntBASIC5.8□□□□□ -1.48
CHD8Q9HCK8 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 AC126335.1-201ENST00000568414 510 ntTSL 2 BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 MIR4776-2-201ENST00000580204 80 ntBASIC5.8□□□□□ -1.48
CHD8Q9HCK8 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms