Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE4Q8N205 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE4Q8N205 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE4Q8N205 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.86□□□□□ -1.15
SYNE4Q8N205 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE4Q8N205 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE4Q8N205 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.86□□□□□ -1.15
SYNE4Q8N205 CASC19-205ENST00000641013 1411 ntBASIC7.86□□□□□ -1.15
SYNE4Q8N205 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.86□□□□□ -1.15
SYNE4Q8N205 AC005332.9-201ENST00000620266 2921 ntBASIC7.85□□□□□ -1.15
SYNE4Q8N205 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE4Q8N205 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE4Q8N205 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE4Q8N205 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE4Q8N205 AC130360.2-201ENST00000533477 1556 ntBASIC7.85□□□□□ -1.15
SYNE4Q8N205 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE4Q8N205 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE4Q8N205 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
SYNE4Q8N205 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE4Q8N205 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.85□□□□□ -1.15
SYNE4Q8N205 CUBNP3-201ENST00000457461 1784 ntBASIC7.85□□□□□ -1.15
SYNE4Q8N205 SNORA21-201ENST00000362423 132 ntBASIC7.85□□□□□ -1.15
SYNE4Q8N205 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC7.85□□□□□ -1.15
SYNE4Q8N205 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.85□□□□□ -1.15
SYNE4Q8N205 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
SYNE4Q8N205 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC7.85□□□□□ -1.15
SYNE4Q8N205 RN7SL705P-201ENST00000481678 294 ntBASIC7.85□□□□□ -1.15
SYNE4Q8N205 NPM1P28-201ENST00000492269 840 ntBASIC7.85□□□□□ -1.15
SYNE4Q8N205 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC7.85□□□□□ -1.15
SYNE4Q8N205 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC7.85□□□□□ -1.15
SYNE4Q8N205 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC7.85□□□□□ -1.15
SYNE4Q8N205 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC7.85□□□□□ -1.15
SYNE4Q8N205 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.85□□□□□ -1.15
SYNE4Q8N205 AC007956.1-201ENST00000555623 542 ntBASIC7.85□□□□□ -1.15
SYNE4Q8N205 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC7.85□□□□□ -1.15
SYNE4Q8N205 AC105036.1-201ENST00000566222 271 ntBASIC7.85□□□□□ -1.15
SYNE4Q8N205 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC7.85□□□□□ -1.15
SYNE4Q8N205 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.85□□□□□ -1.15
SYNE4Q8N205 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.85□□□□□ -1.15
SYNE4Q8N205 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
SYNE4Q8N205 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE4Q8N205 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.85□□□□□ -1.15
SYNE4Q8N205 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.85□□□□□ -1.15
SYNE4Q8N205 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE4Q8N205 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE4Q8N205 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE4Q8N205 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.85□□□□□ -1.15
SYNE4Q8N205 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SYNE4Q8N205 CASC19-238ENST00000641523 1558 ntBASIC7.84□□□□□ -1.15
SYNE4Q8N205 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SYNE4Q8N205 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.84□□□□□ -1.15
SYNE4Q8N205 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.84□□□□□ -1.15
SYNE4Q8N205 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.84□□□□□ -1.15
SYNE4Q8N205 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.84□□□□□ -1.15
SYNE4Q8N205 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
SYNE4Q8N205 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
SYNE4Q8N205 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SYNE4Q8N205 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SYNE4Q8N205 RNU1-49P-201ENST00000363468 159 ntBASIC7.84□□□□□ -1.15
SYNE4Q8N205 RNA5SP242-201ENST00000364171 118 ntBASIC7.84□□□□□ -1.15
SYNE4Q8N205 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
SYNE4Q8N205 PPCS-201ENST00000372556 984 ntTSL 2 BASIC7.84□□□□□ -1.15
SYNE4Q8N205 AL096800.1-201ENST00000405326 893 ntBASIC7.84□□□□□ -1.15
SYNE4Q8N205 U3.43-201ENST00000410734 213 ntBASIC7.84□□□□□ -1.15
SYNE4Q8N205 AL354890.1-201ENST00000413730 346 ntBASIC7.84□□□□□ -1.15
SYNE4Q8N205 GTF3AP1-201ENST00000416942 1004 ntBASIC7.84□□□□□ -1.15
SYNE4Q8N205 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.84□□□□□ -1.15
SYNE4Q8N205 YWHABP1-201ENST00000445359 727 ntBASIC7.84□□□□□ -1.15
SYNE4Q8N205 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC7.84□□□□□ -1.15
SYNE4Q8N205 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC7.84□□□□□ -1.15
SYNE4Q8N205 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC7.84□□□□□ -1.15
SYNE4Q8N205 MTND2P39-201ENST00000457230 764 ntBASIC7.84□□□□□ -1.15
SYNE4Q8N205 UBFD1P1-201ENST00000473259 814 ntBASIC7.84□□□□□ -1.15
SYNE4Q8N205 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC7.84□□□□□ -1.15
SYNE4Q8N205 AC114781.3-201ENST00000512083 142 ntBASIC7.84□□□□□ -1.15
SYNE4Q8N205 PRMT5P1-201ENST00000514351 598 ntBASIC7.84□□□□□ -1.15
SYNE4Q8N205 RNA5SP438-201ENST00000516561 112 ntBASIC7.84□□□□□ -1.15
SYNE4Q8N205 Y_RNA.710-201ENST00000516975 110 ntBASIC7.84□□□□□ -1.15
SYNE4Q8N205 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.84□□□□□ -1.15
SYNE4Q8N205 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.84□□□□□ -1.15
SYNE4Q8N205 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.84□□□□□ -1.15
SYNE4Q8N205 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.84□□□□□ -1.15
SYNE4Q8N205 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.84□□□□□ -1.15
SYNE4Q8N205 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.84□□□□□ -1.15
SYNE4Q8N205 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.84□□□□□ -1.15
SYNE4Q8N205 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC7.84□□□□□ -1.15
SYNE4Q8N205 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
SYNE4Q8N205 AP001823.1-201ENST00000604056 1003 ntBASIC7.84□□□□□ -1.15
SYNE4Q8N205 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.84□□□□□ -1.15
SYNE4Q8N205 AC092574.1-201ENST00000609771 420 ntBASIC7.84□□□□□ -1.15
SYNE4Q8N205 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.84□□□□□ -1.15
SYNE4Q8N205 AC022467.1-201ENST00000614738 749 ntBASIC7.84□□□□□ -1.15
SYNE4Q8N205 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC7.84□□□□□ -1.15
SYNE4Q8N205 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
SYNE4Q8N205 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SYNE4Q8N205 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
SYNE4Q8N205 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.84□□□□□ -1.15
SYNE4Q8N205 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SYNE4Q8N205 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SYNE4Q8N205 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms