Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 FBXO38-201ENST00000296701 3680 ntTSL 2 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 AL512604.2-201ENST00000426946 1314 ntTSL 5 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 LINC02312-201ENST00000555187 3046 ntTSL 2 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 AC092646.2-201ENST00000431242 2095 ntBASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 AC103591.2-201ENST00000265259 766 ntBASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 OR1G1-201ENST00000328890 998 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 RNU5F-7P-201ENST00000363696 115 ntBASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 IGBP1-AS1-201ENST00000366397 542 ntTSL 5 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 FIG4-202ENST00000368941 791 ntTSL 3 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 SNORA35-201ENST00000386104 128 ntBASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 RAB5CP1-201ENST00000395972 580 ntBASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 AC068533.2-201ENST00000411872 306 ntBASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 MTND3P17-201ENST00000416968 344 ntBASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 AC008155.1-201ENST00000421078 329 ntBASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 AC007435.1-201ENST00000421086 415 ntBASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 AL606534.2-201ENST00000436756 624 ntTSL 5 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 GAGE12J-201ENST00000442437 541 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 RPL4P2-201ENST00000447259 1282 ntBASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 LINC00265-202ENST00000448955 468 ntTSL 2 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 RBMY3AP-201ENST00000449381 1145 ntBASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 SNORD42A-201ENST00000459584 64 ntBASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 PHYKPL-205ENST00000476170 824 ntTSL 4 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 AC019235.1-201ENST00000503847 207 ntBASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 AC009646.1-201ENST00000510455 318 ntBASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 SCARNA20.3-201ENST00000516913 131 ntBASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 AC090826.1-203ENST00000569235 490 ntBASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 RPL27-207ENST00000590864 569 ntTSL 2 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 AC008392.1-201ENST00000600941 437 ntTSL 2 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 AC008737.3-201ENST00000601661 221 ntTSL 3 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 AP001429.1-201ENST00000602568 530 ntBASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 COX6CP4-201ENST00000605798 228 ntBASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 AL590282.1-201ENST00000610379 1136 ntBASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 AL121890.2-201ENST00000617644 465 ntBASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 AC244517.10-201ENST00000624396 548 ntAPPRIS P1 TSL 4 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 ABBA01000935.2-201ENST00000637477 838 ntBASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 SOX6-210ENST00000528252 2707 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 CASC19-206ENST00000641028 1430 ntBASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 BBS4-201ENST00000268057 2490 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 PRICKLE2-AS3-201ENST00000473434 2496 ntTSL 2 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 SAXO1-203ENST00000542071 1923 ntAPPRIS ALT2 TSL 3 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 LINC00662-203ENST00000586954 2254 ntTSL 2 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 SEPT4-216ENST00000580844 1396 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 AC107419.1-201ENST00000422048 1879 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 AL669831.5-218ENST00000591702 1873 ntBASIC8.6□□□□□ -1.03
SCUBE3Q8IX30 FHL1-206ENST00000394153 2374 ntTSL 5 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 VPS8-204ENST00000424463 2359 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 MTCO1P23-201ENST00000415223 1526 ntBASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 SSBP2-212ENST00000509053 1534 ntTSL 2 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 NLK-201ENST00000407008 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 AASS-203ENST00000417368 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 SLC9B1P1-201ENST00000331172 1337 ntBASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 SLC9B1P3-201ENST00000452667 1334 ntBASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 AC066616.2-201ENST00000559334 1481 ntBASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 XRCC6P3-201ENST00000422187 1621 ntBASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 SLC16A4-206ENST00000472422 2420 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 PTER-203ENST00000423462 3212 ntTSL 3 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 TSSK4-201ENST00000287913 1257 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 RNA5SP71-201ENST00000362967 126 ntBASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 RNU6-839P-201ENST00000363347 108 ntBASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 RNU6-660P-201ENST00000364566 109 ntBASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 RN7SKP39-201ENST00000410773 322 ntBASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 RNA5SP265-201ENST00000411023 111 ntBASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 PROX1-AS1-201ENST00000413560 496 ntTSL 5 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 PPIAP2-201ENST00000414143 492 ntBASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 GNAI2P2-201ENST00000417003 916 ntBASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 AL049758.1-201ENST00000423154 397 ntBASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms