Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 KCNMB3P1-202ENST00000493696 3389 ntBASIC4.85□□□□□ -1.63
VPS13CQ709C8 MIR223-201ENST00000385204 110 ntBASIC4.85□□□□□ -1.63
VPS13CQ709C8 RPA2P2-201ENST00000419698 796 ntBASIC4.85□□□□□ -1.63
VPS13CQ709C8 TPT1P12-201ENST00000448968 492 ntBASIC4.85□□□□□ -1.63
VPS13CQ709C8 AC016027.4-201ENST00000450866 277 ntBASIC4.85□□□□□ -1.63
VPS13CQ709C8 LDHBP2-201ENST00000456969 1005 ntBASIC4.85□□□□□ -1.63
VPS13CQ709C8 RN7SL459P-201ENST00000481078 302 ntBASIC4.85□□□□□ -1.63
VPS13CQ709C8 AC109481.1-201ENST00000509173 282 ntBASIC4.85□□□□□ -1.63
VPS13CQ709C8 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS13CQ709C8 OR1F2P-201ENST00000570470 933 ntBASIC4.85□□□□□ -1.63
VPS13CQ709C8 AC083809.1-201ENST00000615051 472 ntBASIC4.85□□□□□ -1.63
VPS13CQ709C8 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
VPS13CQ709C8 SLC38A1-201ENST00000398637 8066 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS13CQ709C8 OR5M2P-202ENST00000641241 4242 ntBASIC4.85□□□□□ -1.63
VPS13CQ709C8 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS13CQ709C8 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC4.85□□□□□ -1.63
VPS13CQ709C8 MTR-202ENST00000366577 10529 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS13CQ709C8 CACNA1S-201ENST00000362061 6166 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS13CQ709C8 MORC2-202ENST00000397641 5181 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
VPS13CQ709C8 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.85□□□□□ -1.63
VPS13CQ709C8 AL807761.1-201ENST00000417622 171 ntBASIC4.85□□□□□ -1.63
VPS13CQ709C8 AC019185.1-201ENST00000442718 389 ntBASIC4.85□□□□□ -1.63
VPS13CQ709C8 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
VPS13CQ709C8 AC009963.2-201ENST00000453431 138 ntBASIC4.85□□□□□ -1.63
VPS13CQ709C8 RPS3AP53-201ENST00000454716 778 ntBASIC4.85□□□□□ -1.63
VPS13CQ709C8 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS13CQ709C8 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC4.85□□□□□ -1.63
VPS13CQ709C8 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.85□□□□□ -1.63
VPS13CQ709C8 AC079075.1-201ENST00000559543 878 ntBASIC4.85□□□□□ -1.63
VPS13CQ709C8 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS13CQ709C8 AC087565.3-203ENST00000641018 837 ntBASIC4.85□□□□□ -1.63
VPS13CQ709C8 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS13CQ709C8 POLR2J4-202ENST00000427076 6466 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS13CQ709C8 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS13CQ709C8 SHPRH-206ENST00000438092 6994 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS13CQ709C8 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS13CQ709C8 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS13CQ709C8 RPL7L1P9-201ENST00000431298 745 ntBASIC4.85□□□□□ -1.63
VPS13CQ709C8 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.85□□□□□ -1.63
VPS13CQ709C8 AC245047.1-201ENST00000433276 873 ntBASIC4.85□□□□□ -1.63
VPS13CQ709C8 NPM1P51-201ENST00000443470 744 ntBASIC4.85□□□□□ -1.63
VPS13CQ709C8 RPS29P33-201ENST00000456717 146 ntBASIC4.85□□□□□ -1.63
VPS13CQ709C8 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.85□□□□□ -1.63
VPS13CQ709C8 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS13CQ709C8 MIR3934-201ENST00000579806 107 ntBASIC4.85□□□□□ -1.63
VPS13CQ709C8 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC4.85□□□□□ -1.63
VPS13CQ709C8 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS13CQ709C8 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS13CQ709C8 AC127024.8-201ENST00000623719 2094 ntBASIC4.85□□□□□ -1.63
VPS13CQ709C8 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS13CQ709C8 AC002090.1-201ENST00000625000 2138 ntBASIC4.85□□□□□ -1.63
VPS13CQ709C8 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
VPS13CQ709C8 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC4.84□□□□□ -1.63
VPS13CQ709C8 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VPS13CQ709C8 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS13CQ709C8 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS13CQ709C8 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
VPS13CQ709C8 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
VPS13CQ709C8 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VPS13CQ709C8 CEACAMP9-201ENST00000442990 513 ntBASIC4.84□□□□□ -1.63
VPS13CQ709C8 OR51K1P-201ENST00000510214 950 ntBASIC4.84□□□□□ -1.63
VPS13CQ709C8 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS13CQ709C8 AC087385.3-201ENST00000620477 187 ntBASIC4.84□□□□□ -1.63
VPS13CQ709C8 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VPS13CQ709C8 KLF8-202ENST00000374928 4821 ntTSL 2 BASIC4.84□□□□□ -1.63
VPS13CQ709C8 KIAA1671-202ENST00000401395 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS13CQ709C8 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS13CQ709C8 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VPS13CQ709C8 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS13CQ709C8 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS13CQ709C8 RAB6B-207ENST00000543906 5219 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS13CQ709C8 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VPS13CQ709C8 AC024651.2-201ENST00000562480 2098 ntBASIC4.84□□□□□ -1.63
VPS13CQ709C8 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS13CQ709C8 ANK3-205ENST00000373827 7202 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS13CQ709C8 DOCK8-201ENST00000382329 6124 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VPS13CQ709C8 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC4.84□□□□□ -1.63
VPS13CQ709C8 ZNF611-203ENST00000540744 4417 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
VPS13CQ709C8 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS13CQ709C8 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
VPS13CQ709C8 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
VPS13CQ709C8 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.84□□□□□ -1.63
VPS13CQ709C8 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS13CQ709C8 AC099521.1-201ENST00000482557 334 ntBASIC4.84□□□□□ -1.63
VPS13CQ709C8 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS13CQ709C8 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS13CQ709C8 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS13CQ709C8 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
VPS13CQ709C8 CASC19-248ENST00000641674 1356 ntBASIC4.84□□□□□ -1.63
VPS13CQ709C8 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
VPS13CQ709C8 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
VPS13CQ709C8 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
VPS13CQ709C8 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
VPS13CQ709C8 POU6F1-202ENST00000389243 4698 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
VPS13CQ709C8 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
VPS13CQ709C8 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
VPS13CQ709C8 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.84□□□□□ -1.64
VPS13CQ709C8 SLC35E1P1-201ENST00000419313 864 ntBASIC4.84□□□□□ -1.64
VPS13CQ709C8 OR7E157P-201ENST00000494376 911 ntBASIC4.84□□□□□ -1.64
VPS13CQ709C8 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.84□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms