Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 GIPC1-209ENST00000587969 484 ntTSL 210.23□□□□□ -0.771e-6■□□□□ 8.5
PRPF8Q6P2Q9 NIT1-214ENST00000492411 823 ntTSL 510.16□□□□□ -0.781e-6■□□□□ 8.5
PRPF8Q6P2Q9 NIT1-215ENST00000496768 790 ntTSL 310.16□□□□□ -0.781e-6■□□□□ 8.5
PRPF8Q6P2Q9 SLCO2B1-211ENST00000530012 757 ntTSL 410.13□□□□□ -0.791e-6■□□□□ 8.5
PRPF8Q6P2Q9 SORBS2-205ENST00000393523 842 ntTSL 410.11□□□□□ -0.791e-6■□□□□ 8.5
PRPF8Q6P2Q9 C19orf47-204ENST00000580606 803 ntAPPRIS ALT2 TSL 310.01□□□□□ -0.811e-6■□□□□ 8.5
PRPF8Q6P2Q9 RBPMS-211ENST00000520916 2669 ntTSL 29.98□□□□□ -0.811e-6■□□□□ 8.5
PRPF8Q6P2Q9 PGM3-204ENST00000505470 561 ntTSL 49.98□□□□□ -0.811e-6■□□□□ 8.5
PRPF8Q6P2Q9 TOMM40-204ENST00000589253 207 ntTSL 39.98□□□□□ -0.811e-6■□□□□ 8.5
PRPF8Q6P2Q9 FARP2-204ENST00000413432 6065 ntTSL 29.97□□□□□ -0.811e-6■□□□□ 8.5
PRPF8Q6P2Q9 C19orf47-206ENST00000582006 581 ntAPPRIS ALT2 TSL 49.74□□□□□ -0.851e-6■□□□□ 8.5
PRPF8Q6P2Q9 AC020663.1-201ENST00000588099 556 ntTSL 4 BASIC9.71□□□□□ -0.851e-6■□□□□ 8.5
PRPF8Q6P2Q9 SLCO2B1-212ENST00000530015 5875 ntTSL 29.69□□□□□ -0.861e-6■□□□□ 8.5
PRPF8Q6P2Q9 PGM3-210ENST00000510258 750 ntTSL 39.62□□□□□ -0.871e-6■□□□□ 8.5
PRPF8Q6P2Q9 SORBS2-216ENST00000429056 534 ntTSL 49.36□□□□□ -0.911e-6■□□□□ 8.5
PRPF8Q6P2Q9 LINC02210-CRHR1-202ENST00000634540 2695 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.911e-6■□□□□ 8.5
PRPF8Q6P2Q9 DYNC1LI2-204ENST00000561727 502 ntTSL 48.46□□□□□ -1.061e-6■□□□□ 8.5
PRPF8Q6P2Q9 CHKA-207ENST00000533728 662 ntTSL 28.28□□□□□ -1.081e-6■□□□□ 8.5
PRPF8Q6P2Q9 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC8.18□□□□□ -1.11e-6■□□□□ 8.5
PRPF8Q6P2Q9 SORBS2-207ENST00000414724 590 ntTSL 57.99□□□□□ -1.131e-6■□□□□ 8.5
PRPF8Q6P2Q9 NIT1-207ENST00000477684 499 ntTSL 37.87□□□□□ -1.151e-6■□□□□ 8.5
PRPF8Q6P2Q9 RIOX2-205ENST00000503517 912 ntTSL 27.25□□□□□ -1.251e-6■□□□□ 8.5
PRPF8Q6P2Q9 SORBS2-208ENST00000415274 626 ntTSL 46.98□□□□□ -1.291e-6■□□□□ 8.5
PRPF8Q6P2Q9 SORBS2-220ENST00000435480 487 ntTSL 46.98□□□□□ -1.291e-6■□□□□ 8.5
PRPF8Q6P2Q9 GNL3L-203ENST00000489691 895 ntTSL 36.84□□□□□ -1.311e-6■□□□□ 8.5
PRPF8Q6P2Q9 SORBS2-218ENST00000431902 562 ntTSL 56.54□□□□□ -1.361e-6■□□□□ 8.5
PRPF8Q6P2Q9 TTC27-205ENST00000448773 509 ntTSL 46.26□□□□□ -1.411e-6■□□□□ 8.5
PRPF8Q6P2Q9 EIF4E2-214ENST00000498242 1110 ntTSL 26.17□□□□□ -1.421e-6■□□□□ 8.5
PRPF8Q6P2Q9 ARID1B-213ENST00000636205 824 ntTSL 26.11□□□□□ -1.431e-6■□□□□ 8.5
PRPF8Q6P2Q9 SORBS2-215ENST00000428330 525 ntTSL 45.65□□□□□ -1.511e-6■□□□□ 8.5
PRPF8Q6P2Q9 NIT1-206ENST00000473918 223 ntTSL 35.4□□□□□ -1.551e-6■□□□□ 8.5
PRPF8Q6P2Q9 SORBS2-243ENST00000464819 540 ntTSL 45.2□□□□□ -1.581e-6■□□□□ 8.5
PRPF8Q6P2Q9 LINC02210-CRHR1-201ENST00000587305 560 ntTSL 55.17□□□□□ -1.581e-6■□□□□ 8.5
PRPF8Q6P2Q9 PGM3-207ENST00000507554 556 ntTSL 44.71□□□□□ -1.661e-6■□□□□ 8.5
PRPF8Q6P2Q9 ABL1-203ENST00000393293 532 ntTSL 54.65□□□□□ -1.661e-6■□□□□ 8.5
PRPF8Q6P2Q9 LINC02210-209ENST00000585122 705 ntTSL 54.6□□□□□ -1.671e-6■□□□□ 8.5
PRPF8Q6P2Q9 SORBS2-211ENST00000420158 572 ntTSL 44.37□□□□□ -1.711e-6■□□□□ 8.5
PRPF8Q6P2Q9 SORBS2-213ENST00000421639 572 ntTSL 34.37□□□□□ -1.711e-6■□□□□ 8.5
PRPF8Q6P2Q9 LINC02210-207ENST00000583740 537 ntTSL 54.27□□□□□ -1.731e-6■□□□□ 8.5
PRPF8Q6P2Q9 SORBS2-236ENST00000452351 571 ntTSL 54.17□□□□□ -1.741e-6■□□□□ 8.5
PRPF8Q6P2Q9 RBPMS-212ENST00000520971 315 ntTSL 24.11□□□□□ -1.751e-6■□□□□ 8.5
PRPF8Q6P2Q9 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC3.95□□□□□ -1.781e-6■□□□□ 8.5
PRPF8Q6P2Q9 LINC02210-204ENST00000580220 758 ntTSL 43.95□□□□□ -1.781e-6■□□□□ 8.5
PRPF8Q6P2Q9 LINC02210-206ENST00000582491 718 ntTSL 23.73□□□□□ -1.811e-6■□□□□ 8.5
PRPF8Q6P2Q9 NIFK-202ENST00000423105 686 ntTSL 33.36□□□□□ -1.871e-6■□□□□ 8.5
PRPF8Q6P2Q9 SORBS2-219ENST00000432655 582 ntTSL 33.02□□□□□ -1.931e-6■□□□□ 8.5
PRPF8Q6P2Q9 SORBS2-240ENST00000457934 553 ntTSL 43.02□□□□□ -1.931e-6■□□□□ 8.5
PRPF8Q6P2Q9 SORBS2-233ENST00000451701 582 ntTSL 32.63□□□□□ -1.991e-6■□□□□ 8.5
PRPF8Q6P2Q9 SORBS2-244ENST00000464975 563 ntTSL 42.34□□□□□ -2.041e-6■□□□□ 8.5
PRPF8Q6P2Q9 NIFK-206ENST00000481978 663 ntTSL 22.22□□□□□ -2.051e-6■□□□□ 8.5
PRPF8Q6P2Q9 SORBS2-212ENST00000421420 574 ntTSL 41.78□□□□□ -2.121e-6■□□□□ 8.5
PRPF8Q6P2Q9 RBPMS-216ENST00000522694 613 ntTSL 21.23□□□□□ -2.211e-6■□□□□ 8.5
PRPF8Q6P2Q9 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC0.83□□□□□ -2.281e-6■□□□□ 8.5
PRPF8Q6P2Q9 CTTN-210ENST00000525852 1470 ntTSL 510.43□□□□□ -0.741e-11■□□□□ 8.5
PRPF8Q6P2Q9 AC132008.2-201ENST00000453454 956 ntTSL 4 BASIC9.72□□□□□ -0.854e-15■□□□□ 8.5
PRPF8Q6P2Q9 PHGDH-234ENST00000642041 943 nt14.63□□□□□ -0.073e-11■□□□□ 8.5
PRPF8Q6P2Q9 PHGDH-207ENST00000496756 508 ntTSL 211.51□□□□□ -0.573e-11■□□□□ 8.5
PRPF8Q6P2Q9 PHGDH-221ENST00000641573 1180 nt10.5□□□□□ -0.733e-11■□□□□ 8.5
PRPF8Q6P2Q9 PHGDH-219ENST00000641513 735 nt7.06□□□□□ -1.283e-11■□□□□ 8.5
PRPF8Q6P2Q9 PHGDH-225ENST00000641720 548 nt6.84□□□□□ -1.313e-11■□□□□ 8.5
PRPF8Q6P2Q9 DLG4-210ENST00000493294 573 ntTSL 316.01■□□□□ 0.152e-7■□□□□ 8.5
PRPF8Q6P2Q9 TNFAIP2-206ENST00000560428 773 ntTSL 515.42■□□□□ 0.069e-7■□□□□ 8.5
PRPF8Q6P2Q9 TTLL3-227ENST00000482269 882 ntTSL 214.93□□□□□ -0.029e-7■□□□□ 8.5
PRPF8Q6P2Q9 TUT1-201ENST00000278279 533 ntTSL 414.37□□□□□ -0.119e-7■□□□□ 8.5
PRPF8Q6P2Q9 TSPAN32-202ENST00000339046 1202 ntTSL 213.89□□□□□ -0.192e-7■□□□□ 8.5
PRPF8Q6P2Q9 ZDHHC18-203ENST00000478902 562 ntTSL 513.81□□□□□ -0.22e-7■□□□□ 8.5
PRPF8Q6P2Q9 DLG4-207ENST00000486626 586 ntTSL 513.57□□□□□ -0.242e-7■□□□□ 8.5
PRPF8Q6P2Q9 SHARPIN-204ENST00000530216 673 ntTSL 513.39□□□□□ -0.274e-10■□□□□ 8.5
PRPF8Q6P2Q9 TUT1-207ENST00000494385 699 ntTSL 212.94□□□□□ -0.349e-7■□□□□ 8.5
PRPF8Q6P2Q9 PSMD5-206ENST00000476949 382 ntTSL 212.93□□□□□ -0.349e-7■□□□□ 8.5
PRPF8Q6P2Q9 RNF168-202ENST00000437070 2202 ntTSL 212.61□□□□□ -0.392e-7■□□□□ 8.5
PRPF8Q6P2Q9 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.422e-7■□□□□ 8.5
PRPF8Q6P2Q9 TTLL3-229ENST00000492440 1549 ntTSL 212.39□□□□□ -0.439e-7■□□□□ 8.5
PRPF8Q6P2Q9 ADIRF-203ENST00000561504 700 ntTSL 311.2□□□□□ -0.629e-7■□□□□ 8.5
PRPF8Q6P2Q9 ZDHHC18-204ENST00000488397 1275 ntTSL 211□□□□□ -0.652e-7■□□□□ 8.5
PRPF8Q6P2Q9 PSMD5-205ENST00000471789 567 ntTSL 210.19□□□□□ -0.789e-7■□□□□ 8.5
PRPF8Q6P2Q9 PLOD1-205ENST00000465920 871 ntTSL 510.15□□□□□ -0.792e-7■□□□□ 8.5
PRPF8Q6P2Q9 TNFAIP2-210ENST00000561156 590 ntTSL 410.03□□□□□ -0.89e-7■□□□□ 8.5
PRPF8Q6P2Q9 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.849e-7■□□□□ 8.5
PRPF8Q6P2Q9 CASS4-201ENST00000360314 2619 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.879e-7■□□□□ 8.5
PRPF8Q6P2Q9 SORT1-204ENST00000482236 615 ntTSL 39.46□□□□□ -0.99e-7■□□□□ 8.5
PRPF8Q6P2Q9 ZDHHC18-201ENST00000374141 1002 ntAPPRIS ALT2 TSL 29.28□□□□□ -0.922e-7■□□□□ 8.5
PRPF8Q6P2Q9 TUT1-205ENST00000476907 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.949e-7■□□□□ 8.5
PRPF8Q6P2Q9 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC9.15□□□□□ -0.949e-7■□□□□ 8.5
PRPF8Q6P2Q9 AGAP11-201ENST00000433214 3078 ntTSL 2 BASIC9.01□□□□□ -0.979e-7■□□□□ 8.5
PRPF8Q6P2Q9 TTLL3-223ENST00000466245 616 ntTSL 38.9□□□□□ -0.989e-7■□□□□ 8.5
PRPF8Q6P2Q9 SORT1-205ENST00000483508 759 ntTSL 36.43□□□□□ -1.389e-7■□□□□ 8.5
PRPF8Q6P2Q9 CASS4-203ENST00000497244 2871 ntTSL 1 (best)6.24□□□□□ -1.419e-7■□□□□ 8.5
PRPF8Q6P2Q9 SORT1-210ENST00000633956 561 ntTSL 44.2□□□□□ -1.749e-7■□□□□ 8.5
PRPF8Q6P2Q9 SORT1-207ENST00000493736 583 ntTSL 23.81□□□□□ -1.89e-7■□□□□ 8.5
PRPF8Q6P2Q9 SPTA1-206ENST00000484520 769 ntTSL 33.27□□□□□ -1.899e-7■□□□□ 8.5
PRPF8Q6P2Q9 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC2.93□□□□□ -1.942e-7■□□□□ 8.5
PRPF8Q6P2Q9 DNMT1-206ENST00000586086 489 ntTSL 32.91□□□□□ -1.949e-7■□□□□ 8.5
PRPF8Q6P2Q9 RDH11-208ENST00000556692 801 ntTSL 22.42□□□□□ -2.029e-7■□□□□ 8.5
PRPF8Q6P2Q9 CUX1-210ENST00000497815 947 ntTSL 29.7□□□□□ -0.865e-10■□□□□ 8.5
PRPF8Q6P2Q9 CUX1-220ENST00000607092 559 ntTSL 35.68□□□□□ -1.55e-10■□□□□ 8.5
PRPF8Q6P2Q9 PAH-204ENST00000547319 397 ntTSL 418.33■□□□□ 0.529e-14■□□□□ 8.5
PRPF8Q6P2Q9 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.44e-8■□□□□ 8.5
PRPF8Q6P2Q9 PDXDC2P-NPIPB14P-201ENST00000525331 883 ntTSL 49.69□□□□□ -0.862e-7■□□□□ 8.5
PRPF8Q6P2Q9 PDXDC2P-NPIPB14P-202ENST00000526478 668 ntTSL 27.79□□□□□ -1.162e-7■□□□□ 8.5
Retrieved 100 of 73,762 protein–RNA pairs in 5147.3 ms