RNA–Protein interactions for RNA: ENST00000481978.5

NIFK-206, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 2

Gene NIFK, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-206ENST00000481978 AEBP2Q6ZN18 517 aaPredicted RBP27.06■■□□□ 1.92
NIFK-206ENST00000481978 CHIC1Q5VXU3 224 aa26.25■■□□□ 1.79
NIFK-206ENST00000481978 PHF23Q9BUL5 403 aaPredicted RBP23.04■■□□□ 1.28
NIFK-206ENST00000481978 SENP3Q9H4L4 574 aaPredicted RBP23.04■■□□□ 1.28
NIFK-206ENST00000481978 FOXD1Q16676 465 aa21.38■■□□□ 1.01
NIFK-206ENST00000481978 PLPPR3Q6T4P5 718 aa21.22■□□□□ 0.99
NIFK-206ENST00000481978 PPP6R1Q9UPN7 881 aa20.38■□□□□ 0.85
NIFK-206ENST00000481978 ADRA2BP18089 450 aa20.34■□□□□ 0.85
NIFK-206ENST00000481978 PIAS4Q8N2W9 510 aaPredicted RBP20.09■□□□□ 0.81
NIFK-206ENST00000481978 MSH5O43196 834 aa19.84■□□□□ 0.77
NIFK-206ENST00000481978 SCAF1Q9H7N4 1312 aaKnown RBP18.67■□□□□ 0.58
NIFK-206ENST00000481978 PPP4R3CPQ6ZMV5 832 aa18.65■□□□□ 0.58
NIFK-206ENST00000481978 MAPK8IP2Q13387 824 aaPredicted RBP18.5■□□□□ 0.55
NIFK-206ENST00000481978 POTEDQ86YR6 584 aa18.41■□□□□ 0.54
NIFK-206ENST00000481978 DMRT2Q9Y5R5 561 aa18.36■□□□□ 0.53
NIFK-206ENST00000481978 CNKSR2Q8WXI2 1034 aa18.2■□□□□ 0.5
NIFK-206ENST00000481978 NCBP3Q53F19 620 aaKnown RBP18.13■□□□□ 0.49
NIFK-206ENST00000481978 KCNA4P22459 653 aa17.96■□□□□ 0.47
NIFK-206ENST00000481978 RNF216Q9NWF9 866 aaPredicted RBP17.91■□□□□ 0.46
NIFK-206ENST00000481978 HOXD11P31277 338 aaPredicted RBP17.9■□□□□ 0.46
NIFK-206ENST00000481978 NPM3O75607 178 aaKnown RBP17.84■□□□□ 0.45
NIFK-206ENST00000481978 DCAF8L1A6NGE4 600 aa17.49■□□□□ 0.39
NIFK-206ENST00000481978 DNAJC5BQ9UF47 199 aa17.47■□□□□ 0.39
NIFK-206ENST00000481978 SLC4A1APQ9BWU0 796 aaKnown RBP17.06■□□□□ 0.32
NIFK-206ENST00000481978 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.01■□□□□ 0.317e-11■□□□□ 10.2
NIFK-206ENST00000481978 RNF39Q9H2S5 420 aa16.97■□□□□ 0.31
NIFK-206ENST00000481978 SLC4A2P04920 1241 aa16.9■□□□□ 0.3
NIFK-206ENST00000481978 C1QBPQ07021 282 aaKnown RBP16.77■□□□□ 0.28
NIFK-206ENST00000481978 U3KPZ7 1027 aaPredicted RBP16.72■□□□□ 0.27
NIFK-206ENST00000481978 CACNB1Q02641 598 aaPredicted RBP16.64■□□□□ 0.25
NIFK-206ENST00000481978 FOXD4L1Q9NU39 408 aa16.62■□□□□ 0.25
NIFK-206ENST00000481978 ZBTB22O15209 634 aa16.52■□□□□ 0.24
NIFK-206ENST00000481978 MYCNP04198 464 aaPredicted RBP16.51■□□□□ 0.23
NIFK-206ENST00000481978 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.48■□□□□ 0.23
NIFK-206ENST00000481978 HNRNPUL2Q1KMD3 747 aaKnown RBP16.48■□□□□ 0.23
NIFK-206ENST00000481978 SAMD1Q6SPF0 538 aaPredicted RBP16.4■□□□□ 0.22
NIFK-206ENST00000481978 APLP2Q06481 763 aa16.37■□□□□ 0.21
NIFK-206ENST00000481978 SPINK5Q9NQ38 1064 aaPredicted RBP16.29■□□□□ 0.2
NIFK-206ENST00000481978 EHMT2Q96KQ7 1210 aa16.27■□□□□ 0.2
NIFK-206ENST00000481978 CSRNP3Q8WYN3 585 aa16.25■□□□□ 0.19
NIFK-206ENST00000481978 CAPN15O75808 1086 aa16.24■□□□□ 0.19
NIFK-206ENST00000481978 ZNF219Q9P2Y4 722 aaPredicted RBP16.15■□□□□ 0.18
NIFK-206ENST00000481978 ATXN8OSP0DMR3 200 aa16.11■□□□□ 0.17
NIFK-206ENST00000481978 TRHP20396 242 aaPredicted RBP16.1■□□□□ 0.17
NIFK-206ENST00000481978 DSG3P32926 999 aa16.06■□□□□ 0.16
NIFK-206ENST00000481978 ATF5Q9Y2D1 282 aaPredicted RBP16.04■□□□□ 0.16
NIFK-206ENST00000481978 ABCB7O75027 752 aa15.9■□□□□ 0.14
NIFK-206ENST00000481978 POLA2Q14181 598 aa15.82■□□□□ 0.12
NIFK-206ENST00000481978 ZBTB12Q9Y330 459 aaPredicted RBP15.6■□□□□ 0.09
NIFK-206ENST00000481978 FBLN2P98095 1184 aa15.42■□□□□ 0.06
NIFK-206ENST00000481978 MKRN4PQ13434 485 aaPredicted RBP15.35■□□□□ 0.05
NIFK-206ENST00000481978 RBM42Q9BTD8 480 aaKnown RBP15.33■□□□□ 0.04
NIFK-206ENST00000481978 OSCARQ8IYS5 282 aa15.28■□□□□ 0.04
NIFK-206ENST00000481978 SPDYE2BA6NHP3 402 aa15.14■□□□□ 0.01
NIFK-206ENST00000481978 SPDYE6P0CI01 402 aa15.14■□□□□ 0.01
NIFK-206ENST00000481978 SPDYE2Q495Y8 402 aa15.14■□□□□ 0.01
NIFK-206ENST00000481978 AKT1S1Q96B36 256 aa15.1■□□□□ 0.01
NIFK-206ENST00000481978 ZNF692Q9BU19 519 aaPredicted RBP15.02■□□□□ -0
NIFK-206ENST00000481978 SSUH2Q9Y2M2 353 aa15.01□□□□□ -0.01
NIFK-206ENST00000481978 REM2Q8IYK8 340 aaPredicted RBP14.93□□□□□ -0.02
NIFK-206ENST00000481978 SPDYE4A6NLX3 237 aa14.9□□□□□ -0.02
NIFK-206ENST00000481978 PABPN1Q86U42 306 aaKnown RBP eCLIP14.8□□□□□ -0.04
NIFK-206ENST00000481978 PITPNM1O00562 1244 aa14.75□□□□□ -0.05
NIFK-206ENST00000481978 CHRDL2Q6WN34 429 aa14.75□□□□□ -0.05
NIFK-206ENST00000481978 SPDYE1Q8NFV5 336 aaPredicted RBP14.75□□□□□ -0.05
NIFK-206ENST00000481978 FKBP8Q14318 412 aa14.68□□□□□ -0.06
NIFK-206ENST00000481978 PROM2Q8N271 834 aa14.68□□□□□ -0.06
NIFK-206ENST00000481978 CLEC11AQ9Y240 323 aa14.62□□□□□ -0.07
NIFK-206ENST00000481978 STAG3Q9UJ98 1225 aa14.57□□□□□ -0.08
NIFK-206ENST00000481978 FXR2P51116 673 aaKnown RBP eCLIP14.55□□□□□ -0.08
NIFK-206ENST00000481978 POTEHQ6S545 545 aa14.54□□□□□ -0.08
NIFK-206ENST00000481978 PIP4P2Q8N4L2 257 aa14.51□□□□□ -0.09
NIFK-206ENST00000481978 PRR29P0C7W0 189 aa14.49□□□□□ -0.09
NIFK-206ENST00000481978 PRKAR2AP13861 404 aaKnown RBP14.37□□□□□ -0.11
NIFK-206ENST00000481978 CHADLQ6NUI6 762 aa14.28□□□□□ -0.12
NIFK-206ENST00000481978 CREBZFQ9NS37 354 aa14.28□□□□□ -0.12
NIFK-206ENST00000481978 FBXO3Q9UK99 471 aa14.28□□□□□ -0.12
NIFK-206ENST00000481978 FARP1Q9Y4F1 1045 aaPredicted RBP14.18□□□□□ -0.14
NIFK-206ENST00000481978 MIER1Q8N108 512 aa14.14□□□□□ -0.15
NIFK-206ENST00000481978 MNX1P50219 401 aaPredicted RBP14.12□□□□□ -0.15
NIFK-206ENST00000481978 PLEKHG5O94827 1062 aa14.11□□□□□ -0.15
NIFK-206ENST00000481978 PLCD3Q8N3E9 789 aa14.09□□□□□ -0.15
NIFK-206ENST00000481978 HAX1O00165 279 aa14.08□□□□□ -0.16
NIFK-206ENST00000481978 VASPP50552 380 aaPredicted RBP14.06□□□□□ -0.16
NIFK-206ENST00000481978 C19orf67A6NJJ6 358 aa14.05□□□□□ -0.16
NIFK-206ENST00000481978 NPM1P06748 294 aaKnown RBP eCLIP14.05□□□□□ -0.16
NIFK-206ENST00000481978 ZBTB47Q9UFB7 747 aaPredicted RBP14.01□□□□□ -0.17
NIFK-206ENST00000481978 CD44P16070 742 aaKnown RBP13.94□□□□□ -0.18
NIFK-206ENST00000481978 EVX2Q03828 476 aa13.94□□□□□ -0.18
NIFK-206ENST00000481978 SP7Q8TDD2 431 aaPredicted RBP13.89□□□□□ -0.19
NIFK-206ENST00000481978 PAK3O75914 559 aaPredicted RBP13.85□□□□□ -0.19
NIFK-206ENST00000481978 IFNLR1Q8IU57 520 aaPredicted RBP13.84□□□□□ -0.19
NIFK-206ENST00000481978 KLHL34Q8N239 644 aa13.84□□□□□ -0.19
NIFK-206ENST00000481978 NUBP1P53384 320 aa13.83□□□□□ -0.2
NIFK-206ENST00000481978 ZRANB1Q9UGI0 708 aa13.83□□□□□ -0.2
NIFK-206ENST00000481978 RASEFQ8IZ41 740 aa13.8□□□□□ -0.2
NIFK-206ENST00000481978 ZNF579Q8NAF0 562 aaKnown RBP13.8□□□□□ -0.2
NIFK-206ENST00000481978 TSPYL2Q9H2G4 693 aaPredicted RBP13.75□□□□□ -0.21
NIFK-206ENST00000481978 CLCN6P51797 869 aa13.74□□□□□ -0.21
NIFK-206ENST00000481978 SPOCK2Q92563 424 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms