Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.01□□□□□ -1.45
HMGCS1Q01581 NACAP5-201ENST00000509863 636 ntBASIC6.01□□□□□ -1.45
HMGCS1Q01581 OR51A1P-201ENST00000511110 946 ntBASIC6.01□□□□□ -1.45
HMGCS1Q01581 IGHV4-55-201ENST00000520889 368 ntBASIC6.01□□□□□ -1.45
HMGCS1Q01581 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.01□□□□□ -1.45
HMGCS1Q01581 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.01□□□□□ -1.45
HMGCS1Q01581 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.01□□□□□ -1.45
HMGCS1Q01581 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.01□□□□□ -1.45
HMGCS1Q01581 AC090651.1-201ENST00000567865 634 ntBASIC6.01□□□□□ -1.45
HMGCS1Q01581 MIR3157-201ENST00000578688 85 ntBASIC6.01□□□□□ -1.45
HMGCS1Q01581 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC6.01□□□□□ -1.45
HMGCS1Q01581 MIR212-201ENST00000586026 110 ntBASIC6.01□□□□□ -1.45
HMGCS1Q01581 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.01□□□□□ -1.45
HMGCS1Q01581 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.01□□□□□ -1.45
HMGCS1Q01581 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.01□□□□□ -1.45
HMGCS1Q01581 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
HMGCS1Q01581 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.01□□□□□ -1.45
HMGCS1Q01581 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
HMGCS1Q01581 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.01□□□□□ -1.45
HMGCS1Q01581 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HMGCS1Q01581 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.01□□□□□ -1.45
HMGCS1Q01581 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.01□□□□□ -1.45
HMGCS1Q01581 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HMGCS1Q01581 IMMTP1-201ENST00000435590 2219 ntBASIC6.01□□□□□ -1.45
HMGCS1Q01581 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HMGCS1Q01581 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.01□□□□□ -1.45
HMGCS1Q01581 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6□□□□□ -1.45
HMGCS1Q01581 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6□□□□□ -1.45
HMGCS1Q01581 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6□□□□□ -1.45
HMGCS1Q01581 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
HMGCS1Q01581 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
HMGCS1Q01581 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
HMGCS1Q01581 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
HMGCS1Q01581 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6□□□□□ -1.45
HMGCS1Q01581 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6□□□□□ -1.45
HMGCS1Q01581 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HMGCS1Q01581 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HMGCS1Q01581 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HMGCS1Q01581 Z82198.3-201ENST00000421145 199 ntBASIC6□□□□□ -1.45
HMGCS1Q01581 AC002127.1-201ENST00000421305 225 ntBASIC6□□□□□ -1.45
HMGCS1Q01581 RPS7P14-201ENST00000426405 583 ntBASIC6□□□□□ -1.45
HMGCS1Q01581 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
HMGCS1Q01581 RPL12P49-201ENST00000441100 121 ntBASIC6□□□□□ -1.45
HMGCS1Q01581 AC016908.1-201ENST00000442571 1219 ntBASIC6□□□□□ -1.45
HMGCS1Q01581 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6□□□□□ -1.45
HMGCS1Q01581 AC112187.1-201ENST00000455837 479 ntBASIC6□□□□□ -1.45
HMGCS1Q01581 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6□□□□□ -1.45
HMGCS1Q01581 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6□□□□□ -1.45
HMGCS1Q01581 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6□□□□□ -1.45
HMGCS1Q01581 RN7SL643P-201ENST00000471845 291 ntBASIC6□□□□□ -1.45
HMGCS1Q01581 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6□□□□□ -1.45
HMGCS1Q01581 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6□□□□□ -1.45
HMGCS1Q01581 GM2AP2-201ENST00000491764 562 ntBASIC6□□□□□ -1.45
HMGCS1Q01581 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6□□□□□ -1.45
HMGCS1Q01581 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6□□□□□ -1.45
HMGCS1Q01581 AC092865.1-201ENST00000544395 1023 ntBASIC6□□□□□ -1.45
HMGCS1Q01581 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6□□□□□ -1.45
HMGCS1Q01581 AC037479.1-201ENST00000558361 625 ntBASIC6□□□□□ -1.45
HMGCS1Q01581 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6□□□□□ -1.45
HMGCS1Q01581 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6□□□□□ -1.45
HMGCS1Q01581 MIR6813-201ENST00000621638 56 ntBASIC6□□□□□ -1.45
HMGCS1Q01581 AL162377.2-201ENST00000624532 337 ntBASIC6□□□□□ -1.45
HMGCS1Q01581 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
HMGCS1Q01581 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
HMGCS1Q01581 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
HMGCS1Q01581 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
HMGCS1Q01581 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC6□□□□□ -1.45
HMGCS1Q01581 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HMGCS1Q01581 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HMGCS1Q01581 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6□□□□□ -1.45
HMGCS1Q01581 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
HMGCS1Q01581 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HMGCS1Q01581 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6□□□□□ -1.45
HMGCS1Q01581 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HMGCS1Q01581 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.99□□□□□ -1.45
HMGCS1Q01581 CCNT2P1-201ENST00000423082 1315 ntBASIC5.99□□□□□ -1.45
HMGCS1Q01581 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.99□□□□□ -1.45
HMGCS1Q01581 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
HMGCS1Q01581 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
HMGCS1Q01581 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS1Q01581 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS1Q01581 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS1Q01581 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.99□□□□□ -1.45
HMGCS1Q01581 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS1Q01581 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
HMGCS1Q01581 TEK-204ENST00000519097 3836 ntTSL 2 BASIC5.99□□□□□ -1.45
HMGCS1Q01581 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
HMGCS1Q01581 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS1Q01581 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HMGCS1Q01581 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS1Q01581 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.99□□□□□ -1.45
HMGCS1Q01581 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS1Q01581 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.99□□□□□ -1.45
HMGCS1Q01581 VIM2P-201ENST00000402383 1294 ntBASIC5.99□□□□□ -1.45
HMGCS1Q01581 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.99□□□□□ -1.45
HMGCS1Q01581 RN7SKP129-201ENST00000410288 299 ntBASIC5.99□□□□□ -1.45
HMGCS1Q01581 DHFRP2-201ENST00000414224 547 ntBASIC5.99□□□□□ -1.45
HMGCS1Q01581 OR6R1P-201ENST00000431838 940 ntBASIC5.99□□□□□ -1.45
HMGCS1Q01581 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS1Q01581 MORF4-201ENST00000447135 971 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms