Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC5.53□□□□□ -1.52
HCFC1P51610 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HCFC1P51610 PABPC1P8-201ENST00000452851 2086 ntBASIC5.52□□□□□ -1.53
HCFC1P51610 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HCFC1P51610 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.52□□□□□ -1.53
HCFC1P51610 AL021877.2-201ENST00000624442 10684 ntBASIC5.52□□□□□ -1.53
HCFC1P51610 TEK-204ENST00000519097 3836 ntTSL 2 BASIC5.52□□□□□ -1.53
HCFC1P51610 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.52□□□□□ -1.53
HCFC1P51610 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HCFC1P51610 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.52□□□□□ -1.53
HCFC1P51610 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HCFC1P51610 SNORA51.1-201ENST00000363243 140 ntBASIC5.52□□□□□ -1.53
HCFC1P51610 RN7SKP69-201ENST00000365390 305 ntBASIC5.52□□□□□ -1.53
HCFC1P51610 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.52□□□□□ -1.53
HCFC1P51610 AL391361.1-201ENST00000405580 489 ntBASIC5.52□□□□□ -1.53
HCFC1P51610 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.52□□□□□ -1.53
HCFC1P51610 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
HCFC1P51610 BTG3P1-201ENST00000435859 716 ntBASIC5.52□□□□□ -1.53
HCFC1P51610 GAPDHP48-201ENST00000436626 961 ntBASIC5.52□□□□□ -1.53
HCFC1P51610 AC011742.2-201ENST00000443818 352 ntBASIC5.52□□□□□ -1.53
HCFC1P51610 AC023141.9-201ENST00000458734 412 ntBASIC5.52□□□□□ -1.53
HCFC1P51610 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.52□□□□□ -1.53
HCFC1P51610 RPL12P31-201ENST00000478433 450 ntBASIC5.52□□□□□ -1.53
HCFC1P51610 AC008638.1-201ENST00000506035 866 ntBASIC5.52□□□□□ -1.53
HCFC1P51610 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.52□□□□□ -1.53
HCFC1P51610 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.52□□□□□ -1.53
HCFC1P51610 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.52□□□□□ -1.53
HCFC1P51610 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.52□□□□□ -1.53
HCFC1P51610 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.52□□□□□ -1.53
HCFC1P51610 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.52□□□□□ -1.53
HCFC1P51610 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC5.52□□□□□ -1.53
HCFC1P51610 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.52□□□□□ -1.53
HCFC1P51610 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.52□□□□□ -1.53
HCFC1P51610 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.52□□□□□ -1.53
HCFC1P51610 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
HCFC1P51610 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HCFC1P51610 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HCFC1P51610 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
HCFC1P51610 EIF3EP2-201ENST00000423042 1814 ntBASIC5.52□□□□□ -1.53
HCFC1P51610 DNM1P47-203ENST00000571780 12667 ntBASIC5.52□□□□□ -1.53
HCFC1P51610 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.52□□□□□ -1.53
HCFC1P51610 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HCFC1P51610 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HCFC1P51610 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HCFC1P51610 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
HCFC1P51610 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
HCFC1P51610 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HCFC1P51610 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HCFC1P51610 OR52B3P-201ENST00000314715 928 ntBASIC5.52□□□□□ -1.53
HCFC1P51610 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HCFC1P51610 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HCFC1P51610 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.52□□□□□ -1.53
HCFC1P51610 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.52□□□□□ -1.53
HCFC1P51610 GAPDHP75-201ENST00000433910 943 ntBASIC5.52□□□□□ -1.53
HCFC1P51610 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.52□□□□□ -1.53
HCFC1P51610 RN7SL714P-201ENST00000487050 298 ntBASIC5.52□□□□□ -1.53
HCFC1P51610 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HCFC1P51610 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HCFC1P51610 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HCFC1P51610 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC5.52□□□□□ -1.53
HCFC1P51610 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.52□□□□□ -1.53
HCFC1P51610 RPA2P1-201ENST00000556557 721 ntBASIC5.52□□□□□ -1.53
HCFC1P51610 AC010547.6-201ENST00000571789 193 ntBASIC5.52□□□□□ -1.53
HCFC1P51610 AC020978.7-201ENST00000575953 1187 ntBASIC5.52□□□□□ -1.53
HCFC1P51610 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.52□□□□□ -1.53
HCFC1P51610 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.52□□□□□ -1.53
HCFC1P51610 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.52□□□□□ -1.53
HCFC1P51610 AC126175.1-201ENST00000617041 758 ntBASIC5.52□□□□□ -1.53
HCFC1P51610 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HCFC1P51610 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HCFC1P51610 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HCFC1P51610 OR7E91P-202ENST00000642062 1198 ntBASIC5.52□□□□□ -1.53
HCFC1P51610 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC5.52□□□□□ -1.53
HCFC1P51610 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.51□□□□□ -1.53
HCFC1P51610 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HCFC1P51610 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC5.51□□□□□ -1.53
HCFC1P51610 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HCFC1P51610 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HCFC1P51610 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HCFC1P51610 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HCFC1P51610 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.51□□□□□ -1.53
HCFC1P51610 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HCFC1P51610 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC5.51□□□□□ -1.53
HCFC1P51610 AL162456.1-201ENST00000634535 2006 ntBASIC5.51□□□□□ -1.53
HCFC1P51610 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.51□□□□□ -1.53
HCFC1P51610 CASC19-238ENST00000641523 1558 ntBASIC5.51□□□□□ -1.53
HCFC1P51610 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
HCFC1P51610 RNFT1P3-201ENST00000340898 1052 ntBASIC5.51□□□□□ -1.53
HCFC1P51610 AL096711.1-201ENST00000404780 554 ntBASIC5.51□□□□□ -1.53
HCFC1P51610 MIR1203-201ENST00000408812 85 ntBASIC5.51□□□□□ -1.53
HCFC1P51610 U3.43-201ENST00000410734 213 ntBASIC5.51□□□□□ -1.53
HCFC1P51610 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HCFC1P51610 DUTP4-201ENST00000424782 475 ntBASIC5.51□□□□□ -1.53
HCFC1P51610 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC5.51□□□□□ -1.53
HCFC1P51610 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.51□□□□□ -1.53
HCFC1P51610 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.51□□□□□ -1.53
HCFC1P51610 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.51□□□□□ -1.53
HCFC1P51610 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.51□□□□□ -1.53
HCFC1P51610 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.51□□□□□ -1.53
HCFC1P51610 RPL23AP68-201ENST00000480924 445 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms